PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525911.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 317aa MW: 35555.1 Da PI: 7.9922

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525911.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.3	1.5e-53	13	141	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deelv++yL +k+ + +++ ++ + evd++k+ePwd+p+++ + k+wyfFs+rd+kyatg r+nrat+sgyWkatgkd+++++k XP_023525911.1 13 LPPGFRFHPRDEELVCDYLINKIGSVPHSSSSLFIEVDLNKCEPWDIPREACVGGKKWYFFSQRDRKYATGLRTNRATASGYWKATGKDRPIFHK 107 79***********************999999***********8777799************************************ PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++lvg++ktLvfy+grapkg+kt+Wvmhe+rle XP_023525911.1 108 ANQLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLE 141 *****************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MEKKNISMVE SKLPPGFRFH PRDEELVCDY LINKIGSVPH SSSSLFIEVD LNKCEPWDIP 60 REACVGGKKW YFFSQRDRKY ATGLRTNRAT ASGYWKATGK DRPIFHKANQ LVGMRKTLVF 120 YQGRAPKGRK TEWVMHEFRL EGPLSPLKDS SPKEDWVLCR LFFKHKEVTA QPSTGSSSCY 180 NDVAASSSLP GLMDSYISFD QNPSSHLNEY EQVPCFSIFS QNQTTPPLSN LIQMEPNPAK 240 NIKNFTTVFG GMPNSSTCSS NIDPFGCDSK VLKVVLNNNT QMETNGNSFI GQPSMGEGSS 300 DSFLSEVGDD IASLWNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-111	NAC family protein