PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023521437.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 353aa MW: 40687.7 Da PI: 6.4269

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023521437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.9	6.8e-35	14	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p Gf F+Pt+eel+++yLk+k gk+ + ++ike+d+yk++P++Lp k++ +++ ew+fF + + +++r+t++g Wk+tgk +++++ XP_023521437.1 14 PTGFGFRPTEEELITYYLKNKNVGKEYLV-RFIKEIDLYKFDPEQLPeKSFIPSDNfEWFFFRANTS------NTKRTTTTGCWKSTGKPRRIKA 101 89**********************888.89************5433334555999987644......6899999************* PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++el+g+++++vf++g+ +++kt+Wv+hey l XP_023521437.1 102 RgTNELIGTRHIFVFHRGKGARAVKTNWVIHEYML 136 977788*************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MAGTAEFPFA SSFPTGFGFR PTEEELITYY LKNKNVGKEY LVRFIKEIDL YKFDPEQLPE 60 KSFIPSDNFE WFFFRANTSN TKRTTTTGCW KSTGKPRRIK ARGTNELIGT RHIFVFHRGK 120 GARAVKTNWV IHEYMLHPLA DITSQPFIII RLKENAEERH VCDQEDGQNS AIASHRTKKV 180 TQVGAIREMN RGEQSICEPL GSCTQQPVDA YDDDDGENEN LTQFVNSLIK DGSLDDDATS 240 RICRSPLRSE VNKQSFESEF DVLMKLVSDD KKWEEMTSNN HFNRRNNKTR IVRTHQLQSG 300 RFQLQGGYCC GDTNTNNTYG LIYVAVALLG IIMFAKMWCY TETDAEDWHE ELY

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MAGTAEFPFA SSFPTGFGFR PTEEELITYY LKNKNVGKEY LVRFIKEIDL YKFDPEQLPE  60
KSFIPSDNFE WFFFRANTSN TKRTTTTGCW KSTGKPRRIK ARGTNELIGT RHIFVFHRGK  120
GARAVKTNWV IHEYMLHPLA DITSQPFIII RLKENAEERH VCDQEDGQNS AIASHRTKKV  180
TQVGAIREMN RGEQSICEPL GSCTQQPVDA YDDDDGENEN LTQFVNSLIK DGSLDDDATS  240
RICRSPLRSE VNKQSFESEF DVLMKLVSDD KKWEEMTSNN HFNRRNNKTR IVRTHQLQSG  300
RFQLQGGYCC GDTNTNNTYG LIYVAVALLG IIMFAKMWCY TETDAEDWHE ELY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	7e-32	NAC family protein