PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515187.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 224aa MW: 25593.3 Da PI: 6.5387 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.8 | 6.9e-29 | 11 | 58 | 3 | 50 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 ien + rqvtfskRrng++KKA+ELSvLCdaev +iifs++gklye++ XP_023515187.1 11 IENATSRQVTFSKRRNGLMKKAFELSVLCDAEVGLIIFSPRGKLYEFA 58 9**********************************************8 PP | |||||||
2 | K-box | 77.1 | 4.5e-26 | 90 | 175 | 15 | 99 |
K-box 15 esl.qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e+l ++e+a L k+ie+L+ ++R++lGedL+s+s+ eLqq+e qLeks+ kiR++K e++ eqi++l++kek l+ en +L +k+e XP_023515187.1 90 EHLnHEEAATLMKKIEQLEVSKRKMLGEDLGSCSIDELQQVELQLEKSVCKIRARKVEVFEEQIKQLKHKEKLLEAENAKLLEKWE 175 44415789**************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MVRGKTQMRL IENATSRQVT FSKRRNGLMK KAFELSVLCD AEVGLIIFSP RGKLYEFANS 60 SMQATLERYR KHAKTKEALD PPSVNDIQLE HLNHEEAATL MKKIEQLEVS KRKMLGEDLG 120 SCSIDELQQV ELQLEKSVCK IRARKVEVFE EQIKQLKHKE KLLEAENAKL LEKWESEAEG 180 GVKEVERGEN LTNYAESSSP SSEVETELFI GPPETRPRTF LSLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 4e-70 | MIKC_MADS family protein |