PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515038.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ARR-B | ||||||||
Protein Properties | Length: 382aa MW: 43706.1 Da PI: 6.6704 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 58 | 2.1e-18 | 194 | 242 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kp+l Wt++LH+ F++a+e L G + + Pk+il+lm+v+gL e+v SHLQ XP_023515038.1 194 KPKLIWTQQLHKTFLQAIEAL-GVD-THPKEILQLMNVPGLRKENVSSHLQ 242 79*******************.777.79**********************9 PP | |||||||
2 | Myb_DNA-binding | 25.7 | 2.6e-08 | 197 | 242 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwq 45 + WT+++++ +++a++ lG + ++k I + m+ g+ +++ s++q XP_023515038.1 197 LIWTQQLHKTFLQAIEALGVDtHPKEILQLMNvPGLRKENVSSHLQ 242 56******************************************98 PP | |||||||
3 | Response_reg | 57.7 | 6.7e-20 | 15 | 123 | 1 | 108 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vd + + ++++ ++l gy e+ +a+ + +al+++ke++ ++lil+D +p+m +ell++i e+ ++lpi+++t+ ++e l +l G XP_023515038.1 15 VLVVDHDSTTLKIVSKMLGVCGY-EAVTAKCAIDALRIVKERKndIHLILTDTHLPDMGRYELLEKIMEQTSTLPIVAMTTDDNEIVKLGCLFKG 108 89*********************.9999***********887777**********************99999*********************** PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a+ +l+Kp ++++ XP_023515038.1 109 AMLCLVKPLTMKNIK 123 ********9998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence |
MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGVCGYEAV TAKCAIDALR IVKERKNDIH 60 LILTDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK 120 NIKDLWQFLF IGGRERSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEEVSTR 180 QVEGDGSEST GPKKPKLIWT QQLHKTFLQA IEALGVDTHP KEILQLMNVP GLRKENVSSH 240 LQFRFSLKRG QDVKKKTFES FETAQIPNHR TKLPINVDIF VAKPQETQPQ LCNNLSSTSI 300 NSNLMGSCDV VSSESCFSKV ITSQTCSMNS TQRRSLEDQE RRQWFECNRK EMTSTMVEEQ 360 GHCMFTVDEE LDGVLDVHDL LF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 2e-39 | ARR-B family protein |