PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515036.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ARR-B | ||||||||
Protein Properties | Length: 383aa MW: 43834.3 Da PI: 6.8379 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 66.6 | 4.4e-21 | 194 | 246 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l Wt++LH+ F++a+e L G + + Pk+il+lm+v+gL e+v SHLQk+R XP_023515036.1 194 KPKLIWTQQLHKTFLQAIEAL-GVD-THPKEILQLMNVPGLRKENVSSHLQKFRF 246 79*******************.777.79**************************6 PP | |||||||
2 | Myb_DNA-binding | 30.7 | 7.3e-10 | 197 | 245 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 + WT+++++ +++a++ lG + ++k I + m+ g+ +++ s++qk++ XP_023515036.1 197 LIWTQQLHKTFLQAIEALGVDtHPKEILQLMNvPGLRKENVSSHLQKFR 245 56*********************************************97 PP | |||||||
3 | Response_reg | 57.7 | 6.7e-20 | 15 | 123 | 1 | 108 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vd + + ++++ ++l gy e+ +a+ + +al+++ke++ ++lil+D +p+m +ell++i e+ ++lpi+++t+ ++e l +l G XP_023515036.1 15 VLVVDHDSTTLKIVSKMLGVCGY-EAVTAKCAIDALRIVKERKndIHLILTDTHLPDMGRYELLEKIMEQTSTLPIVAMTTDDNEIVKLGCLFKG 108 89*********************.9999***********887777**********************99999*********************** PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a+ +l+Kp ++++ XP_023515036.1 109 AMLCLVKPLTMKNIK 123 ********9998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence |
MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGVCGYEAV TAKCAIDALR IVKERKNDIH 60 LILTDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK 120 NIKDLWQFLF IGGRERSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEEVSTR 180 QVEGDGSEST GPKKPKLIWT QQLHKTFLQA IEALGVDTHP KEILQLMNVP GLRKENVSSH 240 LQKFRFSLKR GQDVKKKTFE SFETAQIPNH RTKLPINVDI FVAKPQETQP QLCNNLSSTS 300 INSNLMGSCD VVSSESCFSK VITSQTCSMN STQRRSLEDQ ERRQWFECNR KEMTSTMVEE 360 QGHCMFTVDE ELDGVLDVHD LLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 2e-41 | ARR-B family protein |