PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515034.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ARR-B | ||||||||
Protein Properties | Length: 384aa MW: 43932.4 Da PI: 7.0245 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 75.8 | 5.7e-24 | 194 | 247 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l Wt++LH+ F++a+e L G +kA Pk+il+lm+v+gL e+v SHLQk+R XP_023515034.1 194 KPKLIWTQQLHKTFLQAIEAL-GVDKAHPKEILQLMNVPGLRKENVSSHLQKFRF 247 79*******************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 30.5 | 8.5e-10 | 197 | 246 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 + WT+++++ +++a++ lG + ++k I + m+ g+ +++ s++qk++ XP_023515034.1 197 LIWTQQLHKTFLQAIEALGVDkaHPKEILQLMNvPGLRKENVSSHLQKFR 246 56**********************************************97 PP | |||||||
3 | Response_reg | 57.7 | 6.7e-20 | 15 | 123 | 1 | 108 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vd + + ++++ ++l gy e+ +a+ + +al+++ke++ ++lil+D +p+m +ell++i e+ ++lpi+++t+ ++e l +l G XP_023515034.1 15 VLVVDHDSTTLKIVSKMLGVCGY-EAVTAKCAIDALRIVKERKndIHLILTDTHLPDMGRYELLEKIMEQTSTLPIVAMTTDDNEIVKLGCLFKG 108 89*********************.9999***********887777**********************99999*********************** PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a+ +l+Kp ++++ XP_023515034.1 109 AMLCLVKPLTMKNIK 123 ********9998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence |
MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGVCGYEAV TAKCAIDALR IVKERKNDIH 60 LILTDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK 120 NIKDLWQFLF IGGRERSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEEVSTR 180 QVEGDGSEST GPKKPKLIWT QQLHKTFLQA IEALGVDKAH PKEILQLMNV PGLRKENVSS 240 HLQKFRFSLK RGQDVKKKTF ESFETAQIPN HRTKLPINVD IFVAKPQETQ PQLCNNLSST 300 SINSNLMGSC DVVSSESCFS KVITSQTCSM NSTQRRSLED QERRQWFECN RKEMTSTMVE 360 EQGHCMFTVD EELDGVLDVH DLLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 2e-44 | ARR-B family protein |