PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023514063.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 918aa MW: 104473 Da PI: 7.7925

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023514063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	163.5	3.8e-51	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e + rwl+++ei+aiL n++ + ++ ++ + p+sg+++L+nrk++r+frkDG++wkkkkdgkt++E+he+LKvg+ve +++yYah+ +n+tf rr XP_023514063.1 35 EaSGRWLRPNEIHAILCNYKYFVIHVKPVNLPTSGTIVLFNRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNVERIHVYYAHGLDNTTFVRR 129 4478***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_023514063.1 130 CYWLLDKTLEHIVLVHYRETQ 150 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 918 aa Download sequence
MSLAMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNYKYFVIHV 60 KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG 120 LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSPMHLQ SSPSMSMNSN SGSVSDPSTP 180 CLLSEELDSR DNHGYSVDEN ERSEPRDTTT AMNHEQRLHE INTLEWDELL VTDEPFKPSM 240 PKGDRFSYFD QRSQVPTNVA NNLLGNTPLF NNPVESIGSA YMPLTSGQTN LNVQSKESIP 300 ITSLDNLLDD GLLQSQDSFG RWINEVITES PDTVIDPAII EPSISSIHNS FTDPTLNHCQ 360 SSVMEQIFNI TDISPAWAFS TEKTKILITG YFHNEYLHLA NSNILVVCGN ASVNAGLIQP 420 GVYRCVVQPH STGLVNLFVS LDGHKPISQV LNFEYRAPLL REPVVASEQI QKWEEFQVQM 480 RLAHLLFSTS RSLSIMSTKL SSTSLNEARK FAVKTSDISD SWIYLLNSIK ENNTPFPQAR 540 DGVLEIILKS RLREWLIERV AEGSKKSTDF DIKGQGVIHL CAILGYTWAI HLFSWSGLSI 600 NFRDKFGWTA LHWAAYYGRE KMVAVLLSVG AKPNLVTDPS SKNPLGYIAA DLASMNGYDG 660 LAAYLSEKAL VSHFNDMSLA GNVRGSLETS TITNVTNSDS ISEEQMYMKE TLAAYRTAAD 720 AAARIQTAFR ENSLKQRTQA IEFSTPEDEA RGIVAAMKIQ HAYRNFESRK RMAAAARIQY 780 RFRTWKIRKE FLNMRRHAIR IQAAFRGFQM RRQYRKILWS VGVIDKAILR WRLKRKGFRG 840 LQVAPAEVTE KQEIGVEEDF YHVSQKQAEE RVEKAVVRVQ ALFRSKKAQE EYRRMKLTYD 900 EAALEYEELS HPDMNLSS

Sequence ? help Back to Top

Protein Sequence Length: 918 aa Download sequence

MSLAMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNYKYFVIHV  60
KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG  120
LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSPMHLQ SSPSMSMNSN SGSVSDPSTP  180
CLLSEELDSR DNHGYSVDEN ERSEPRDTTT AMNHEQRLHE INTLEWDELL VTDEPFKPSM  240
PKGDRFSYFD QRSQVPTNVA NNLLGNTPLF NNPVESIGSA YMPLTSGQTN LNVQSKESIP  300
ITSLDNLLDD GLLQSQDSFG RWINEVITES PDTVIDPAII EPSISSIHNS FTDPTLNHCQ  360
SSVMEQIFNI TDISPAWAFS TEKTKILITG YFHNEYLHLA NSNILVVCGN ASVNAGLIQP  420
GVYRCVVQPH STGLVNLFVS LDGHKPISQV LNFEYRAPLL REPVVASEQI QKWEEFQVQM  480
RLAHLLFSTS RSLSIMSTKL SSTSLNEARK FAVKTSDISD SWIYLLNSIK ENNTPFPQAR  540
DGVLEIILKS RLREWLIERV AEGSKKSTDF DIKGQGVIHL CAILGYTWAI HLFSWSGLSI  600
NFRDKFGWTA LHWAAYYGRE KMVAVLLSVG AKPNLVTDPS SKNPLGYIAA DLASMNGYDG  660
LAAYLSEKAL VSHFNDMSLA GNVRGSLETS TITNVTNSDS ISEEQMYMKE TLAAYRTAAD  720
AAARIQTAFR ENSLKQRTQA IEFSTPEDEA RGIVAAMKIQ HAYRNFESRK RMAAAARIQY  780
RFRTWKIRKE FLNMRRHAIR IQAAFRGFQM RRQYRKILWS VGVIDKAILR WRLKRKGFRG  840
LQVAPAEVTE KQEIGVEEDF YHVSQKQAEE RVEKAVVRVQ ALFRSKKAQE EYRRMKLTYD  900
EAALEYEELS HPDMNLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein