PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023514062.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 920aa MW: 104714 Da PI: 7.7925

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023514062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	163.5	3.8e-51	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e + rwl+++ei+aiL n++ + ++ ++ + p+sg+++L+nrk++r+frkDG++wkkkkdgkt++E+he+LKvg+ve +++yYah+ +n+tf rr XP_023514062.1 35 EaSGRWLRPNEIHAILCNYKYFVIHVKPVNLPTSGTIVLFNRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNVERIHVYYAHGLDNTTFVRR 129 4478***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_023514062.1 130 CYWLLDKTLEHIVLVHYRETQ 150 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 920 aa Download sequence
MSLAMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNYKYFVIHV 60 KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG 120 LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSPMHLQ LQSSPSMSMN SNSGSVSDPS 180 TPCLLSEELD SRDNHGYSVD ENERSEPRDT TTAMNHEQRL HEINTLEWDE LLVTDEPFKP 240 SMPKGDRFSY FDQRSQVPTN VANNLLGNTP LFNNPVESIG SAYMPLTSGQ TNLNVQSKES 300 IPITSLDNLL DDGLLQSQDS FGRWINEVIT ESPDTVIDPA IIEPSISSIH NSFTDPTLNH 360 CQSSVMEQIF NITDISPAWA FSTEKTKILI TGYFHNEYLH LANSNILVVC GNASVNAGLI 420 QPGVYRCVVQ PHSTGLVNLF VSLDGHKPIS QVLNFEYRAP LLREPVVASE QIQKWEEFQV 480 QMRLAHLLFS TSRSLSIMST KLSSTSLNEA RKFAVKTSDI SDSWIYLLNS IKENNTPFPQ 540 ARDGVLEIIL KSRLREWLIE RVAEGSKKST DFDIKGQGVI HLCAILGYTW AIHLFSWSGL 600 SINFRDKFGW TALHWAAYYG REKMVAVLLS VGAKPNLVTD PSSKNPLGYI AADLASMNGY 660 DGLAAYLSEK ALVSHFNDMS LAGNVRGSLE TSTITNVTNS DSISEEQMYM KETLAAYRTA 720 ADAAARIQTA FRENSLKQRT QAIEFSTPED EARGIVAAMK IQHAYRNFES RKRMAAAARI 780 QYRFRTWKIR KEFLNMRRHA IRIQAAFRGF QMRRQYRKIL WSVGVIDKAI LRWRLKRKGF 840 RGLQVAPAEV TEKQEIGVEE DFYHVSQKQA EERVEKAVVR VQALFRSKKA QEEYRRMKLT 900 YDEAALEYEE LSHPDMNLSS

Sequence ? help Back to Top

Protein Sequence Length: 920 aa Download sequence

MSLAMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNYKYFVIHV  60
KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG  120
LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSPMHLQ LQSSPSMSMN SNSGSVSDPS  180
TPCLLSEELD SRDNHGYSVD ENERSEPRDT TTAMNHEQRL HEINTLEWDE LLVTDEPFKP  240
SMPKGDRFSY FDQRSQVPTN VANNLLGNTP LFNNPVESIG SAYMPLTSGQ TNLNVQSKES  300
IPITSLDNLL DDGLLQSQDS FGRWINEVIT ESPDTVIDPA IIEPSISSIH NSFTDPTLNH  360
CQSSVMEQIF NITDISPAWA FSTEKTKILI TGYFHNEYLH LANSNILVVC GNASVNAGLI  420
QPGVYRCVVQ PHSTGLVNLF VSLDGHKPIS QVLNFEYRAP LLREPVVASE QIQKWEEFQV  480
QMRLAHLLFS TSRSLSIMST KLSSTSLNEA RKFAVKTSDI SDSWIYLLNS IKENNTPFPQ  540
ARDGVLEIIL KSRLREWLIE RVAEGSKKST DFDIKGQGVI HLCAILGYTW AIHLFSWSGL  600
SINFRDKFGW TALHWAAYYG REKMVAVLLS VGAKPNLVTD PSSKNPLGYI AADLASMNGY  660
DGLAAYLSEK ALVSHFNDMS LAGNVRGSLE TSTITNVTNS DSISEEQMYM KETLAAYRTA  720
ADAAARIQTA FRENSLKQRT QAIEFSTPED EARGIVAAMK IQHAYRNFES RKRMAAAARI  780
QYRFRTWKIR KEFLNMRRHA IRIQAAFRGF QMRRQYRKIL WSVGVIDKAI LRWRLKRKGF  840
RGLQVAPAEV TEKQEIGVEE DFYHVSQKQA EERVEKAVVR VQALFRSKKA QEEYRRMKLT  900
YDEAALEYEE LSHPDMNLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein