PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023511417.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 313aa MW: 36138.7 Da PI: 6.9851 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.6 | 8.7e-52 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhP+deelv +yLk+kveg ++el evi+ +d+yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkdk++ XP_023511417.1 6 LPPGFRFHPRDEELVGYYLKRKVEGLPIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKIN 99 79****************************.99**************95344555788************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +++g +ktLvf++grap+g + dWvmheyrl XP_023511417.1 100 C-QFSVMGYRKTLVFHRGRAPSGDRMDWVMHEYRL 133 *.8889***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MGSGSLPPGF RFHPRDEELV GYYLKRKVEG LPIELEVIPV IDLYKFDPWE LPEKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDKKINC QFSVMGYRKT LVFHRGRAPS 120 GDRMDWVMHE YRLCDEFSHG TPNFKGAFAL CRIVKKNDNP REPKGNVVGN GRDSEDSTST 180 KLVVSNEFSN ISKDDSSQTN FLTDESRLSS PMTSSYDTNM MSWCNMSIME TNREKVWISP 240 DLILDSSKDY TEMQGAMSIC FPRLYYSGST IPWSPYEYSN YTGNDIEFED NLNQIGGCIP 300 PYSTHLNRYP NCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 1e-101 | NAC family protein |