![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023001656.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 336aa MW: 37632.9 Da PI: 6.516 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 69.2 | 5.3e-22 | 82 | 141 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ XP_023001656.1 82 SRWNPTPEQLRVLEELYRRgTRTPSADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 141 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 118.3 | 3.5e-38 | 81 | 143 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ+++Leely++G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ XP_023001656.1 81 SSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 143 79***********************************************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 336 aa Download sequence |
MWMMGYNDAG DLNFPADSFT PRRLRPLLPR PLSSLSSTAA VNPPFNLIHT NDFFSQFHHM 60 ATVTDQTKRE LNNAPPPVVV SSRWNPTPEQ LRVLEELYRR GTRTPSADQI QHITAQLRRY 120 GKIEGKNVFY WFQNHKARER QKRRRQMESA ITADHSAREP GILERKDSGS GRTVYEEQTK 180 NWAPSSNCTT LPEESAPIQG WIQFQGFVQN DTNNNNNNPP SSSLHFMHSP PTTALDGGEA 240 QLMMNTAPIP TTTTATATVT TIMHSKSHSN IGGFAPNGVE ELEESEEAET LQLFPLCSDS 300 RNGEISEGKN GFETVGSSAN MTPLQFFEFL PLKNSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18010.1 | 5e-52 | WOX family protein |