PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942372.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 965aa MW: 106695 Da PI: 6.5641

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942372.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.2	7.7e-29	565	616	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_022942372.1 565 AEKSISLDVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 616 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 965 aa Download sequence
MTEPKPDSDH LSPFFPKSHR SGADDRNPIM DFDLDLDIPW PLDQTPLFST SDHLASPLWA 60 FSEADDGEDS KFAAYACSVL GTSNLNSVPQ KPIENHKFKI LPVPSENPDG YCLIKEKMAQ 120 ALRYIKDLSD QQVLAQVWAP VKNGDKVVLS TSGQPFVLDT QSNGLHRYRL VSLTYMFSLD 180 TELDGSLGLP GRVFQQKLPE WTPNVQYYSS KEYSRLRHAL DYNVQGTLAL PVFDPSGQSC 240 LGVLELIMTS PRINYAPEVD KVCKALQAVN LKSSEILDRP NIQICNEGRQ NALAEILAVL 300 TVVCETHNLP LAQTWVPCRH RNVLANGGGL KKSCTSFDGS CMGRICMSAT EVASYVVDAH 360 KWGFREACLE HHLQKGQGVS GRAFSSHSSC FCGDITQFCK NEYPLVHYAL MFGLKSCFSI 420 CLRSKFTGDD EYILEFFLPP SLVDYQEQKT LLGAMMATMK QHFYTLKVAS GIKLEEGGIV 480 EVVQASRNGG FESRLECIHI PPESDAMPNT GEVAALETLQ QRSLMVHDAP KDENNTVRDR 540 ESDNPVPCVQ NKEVKKTSKR KRGKAEKSIS LDVLQQYFAG SLKDAAKSLG VCPTTMKRIC 600 RQHGISRWPS RKINKVNRSL SKLKRVIDSV QGNEGTFGMS SLATSPLPVA VSSSSHPLTP 660 DGSNQNFFFA SQPSDPQRKE TNTSEAQTNN TQARLKDQLL RGVSNPEELF HEQNGSLMKL 720 GNGFNNFRTG SGSRDESTGT PTSHGSCQGS PANESNPLSI HHQEQCVRRG SPEAAAFHPI 780 DKPNTSTRAC PVPDTLLMVE PKEPFGGMLI KDAGSSKDLK NLCASVADAV LDDQVPKFCW 840 PRPSDIAMRQ PMESVCHTVP HISARQEPSR MTIKATYKDD IIRFQISTCT GIVELQEEVA 900 KRLKLDIGTF DIKYMDDDRE WVLTACDADL QECVDISKAS GSNIIRLLVH DLSVNLGSSC 960 ESTRE

Sequence ? help Back to Top

Protein Sequence Length: 965 aa Download sequence

MTEPKPDSDH LSPFFPKSHR SGADDRNPIM DFDLDLDIPW PLDQTPLFST SDHLASPLWA  60
FSEADDGEDS KFAAYACSVL GTSNLNSVPQ KPIENHKFKI LPVPSENPDG YCLIKEKMAQ  120
ALRYIKDLSD QQVLAQVWAP VKNGDKVVLS TSGQPFVLDT QSNGLHRYRL VSLTYMFSLD  180
TELDGSLGLP GRVFQQKLPE WTPNVQYYSS KEYSRLRHAL DYNVQGTLAL PVFDPSGQSC  240
LGVLELIMTS PRINYAPEVD KVCKALQAVN LKSSEILDRP NIQICNEGRQ NALAEILAVL  300
TVVCETHNLP LAQTWVPCRH RNVLANGGGL KKSCTSFDGS CMGRICMSAT EVASYVVDAH  360
KWGFREACLE HHLQKGQGVS GRAFSSHSSC FCGDITQFCK NEYPLVHYAL MFGLKSCFSI  420
CLRSKFTGDD EYILEFFLPP SLVDYQEQKT LLGAMMATMK QHFYTLKVAS GIKLEEGGIV  480
EVVQASRNGG FESRLECIHI PPESDAMPNT GEVAALETLQ QRSLMVHDAP KDENNTVRDR  540
ESDNPVPCVQ NKEVKKTSKR KRGKAEKSIS LDVLQQYFAG SLKDAAKSLG VCPTTMKRIC  600
RQHGISRWPS RKINKVNRSL SKLKRVIDSV QGNEGTFGMS SLATSPLPVA VSSSSHPLTP  660
DGSNQNFFFA SQPSDPQRKE TNTSEAQTNN TQARLKDQLL RGVSNPEELF HEQNGSLMKL  720
GNGFNNFRTG SGSRDESTGT PTSHGSCQGS PANESNPLSI HHQEQCVRRG SPEAAAFHPI  780
DKPNTSTRAC PVPDTLLMVE PKEPFGGMLI KDAGSSKDLK NLCASVADAV LDDQVPKFCW  840
PRPSDIAMRQ PMESVCHTVP HISARQEPSR MTIKATYKDD IIRFQISTCT GIVELQEEVA  900
KRLKLDIGTF DIKYMDDDRE WVLTACDADL QECVDISKAS GSNIIRLLVH DLSVNLGSSC  960
ESTRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein