PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772669.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 937aa    MW: 103558 Da    PI: 5.0517
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.82.4e-24149250199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        ++++ + ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv +++L++gD+v+F   +++
  XP_022772669.1 149 FCKTLTASDTSTHGGFSVPRRAAEKLfppldytMQPP-T-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFI--RDE 239
                     99*********************999*****954444.4.38************************************************..457 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+v+v+r+
  XP_022772669.1 240 KSQLLVGVRRA 250
                     7778*****97 PP
2Auxin_resp117.11.4e-38275358183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPra++seFv++++k++k+++ ++vsvGmRf m+fete+s +rr++Gt+vg+sdldp+rWp+SkWr+L+
  XP_022772669.1 275 AAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYgCQVSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQ 358
                     79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 937 aa     Download sequence    
MGSVVEEKIK TGALVNVGAQ ATLLEEMKLL KEMQDQSGTQ KAINSELWHA CAGPLVFLPQ  60
VGSLVYYFPQ GHSEQVAVST KRMATSRIPN YPNLPSQLMC QVRNVTLHAD RDTDEIYAQI  120
SLQTVNSEKD VFHIPDFGFK PSKHPSEFFC KTLTASDTST HGGFSVPRRA AEKLFPPLDY  180
TMQPPTQELV VRDLHDNTWT FRHIYRGQPK RHLLTTGWSL FVGSKRLRAG DSVLFIRDEK  240
SQLLVGVRRA NRQQTTLPSS VLSADSMHIG VLAAAAHAAA NRSPFTIFYN PRACPSEFVI  300
PLAKYRKSVY GCQVSVGMRF GMMFETEESG KRRYMGTIVG ISDLDPLRWP GSKWRNLQVE  360
WDEPGCNDKQ NRVSAWEIET PESLFIFPSL TSGLKRPLYP GILGVESEWG SLIKRPLLQF  420
PENGNGNLPY SISNLCSEQL MKMMLKPQPV NPPGIFASTL QQTSAAKGSP LEEMKNVQST  480
SNQKPQLIQT ENLLIENQNL SQLVPYQPDP INSNLSNING NGSLHPANKF ESQTQARSKN  540
EKLKLEPEHA TDQLSQLTST SKCNEEKLTA NAISPTILNQ LSFPNQNQIP CQLQNNPGPI  600
QSQLESSLVQ AHQLQVSQAD ISTLSSFLPF LDTDEWMSNL SPCQPLAGNY RSPGSIPESG  660
LQDSSVIFPE ATNPLTTGGQ DTWDHQLNNC RFLSQADQLA SFTQQDPCGL SSGEVRDLSD  720
DSNNQSGIYS CLNIDVCNGG SAVIDPSVSS VILDEFCSLK EAEFQNPSDC LVGNFSSSQD  780
VQSQITSASL ADSQAFSRQD LPDSSGGTSS SNVDFDESGL LLNNSWQQMA PRVRTYTKVQ  840
KAGSVGRSID VNSFKNYDEL ISAIERMFGL NGLLEDPKGS GWKLVYVDYE NDVLLVGDDP  900
WEAFVGCVRC IRILSPTEVQ QMSEEGMKLL NIATEMH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein