PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771335.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 388aa MW: 42591.5 Da PI: 5.599

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	110	1.2e-34	262	316	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGsekAtPk +l++mkv+gLt++hvkSHLQkYR+ XP_022771335.1 262 KPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLKIMKVEGLTIYHVKSHLQKYRT 316 79****************************************************8 PP
2	Myb_DNA-binding	55.7	1.1e-17	264	315	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m +g+t +++ks++qky+ XP_022771335.1 264 RMRWTPELHEAFVEAVNQLGGSekaTPKGVLKIMKvEGLTIYHVKSHLQKYR 315 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MEARPALSIQ RSGARQLSDL GMSGGLSSSL PALSAHLEET YPKLPDTQQL SAERELRTRP 60 LVHATHAPTN SGVVGHIFSS SSGFSSELHY SSAPPCEKHS RNAPFISQLP TNAAALPLPQ 120 SSNSALPQST ISSNYKKENR GSWCTDPGFL ECPISSPVQS SQVESSSCCG IMTSEDFSKR 180 NDWQEWADQL ITDDEALASN WNELLVDNNV TDLEPKVAYQ VAKPCTTMPA QKPQAHQQLP 240 SPSVESPSVV NASSSANNAP AKPRMRWTPE LHEAFVEAVN QLGGSEKATP KGVLKIMKVE 300 GLTIYHVKSH LQKYRTARYR PESSEGSSEK KLTPIDDISS LDLKTGAGIT EALQLQMEVQ 360 KRLHEQLEDV LSNSWNEEWL YEIYFVGY

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MEARPALSIQ RSGARQLSDL GMSGGLSSSL PALSAHLEET YPKLPDTQQL SAERELRTRP  60
LVHATHAPTN SGVVGHIFSS SSGFSSELHY SSAPPCEKHS RNAPFISQLP TNAAALPLPQ  120
SSNSALPQST ISSNYKKENR GSWCTDPGFL ECPISSPVQS SQVESSSCCG IMTSEDFSKR  180
NDWQEWADQL ITDDEALASN WNELLVDNNV TDLEPKVAYQ VAKPCTTMPA QKPQAHQQLP  240
SPSVESPSVV NASSSANNAP AKPRMRWTPE LHEAFVEAVN QLGGSEKATP KGVLKIMKVE  300
GLTIYHVKSH LQKYRTARYR PESSEGSSEK KLTPIDDISS LDLKTGAGIT EALQLQMEVQ  360
KRLHEQLEDV LSNSWNEEWL YEIYFVGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	5e-70	G2-like family protein