PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022717669.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 589aa MW: 64908.4 Da PI: 8.1246

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022717669.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.2	4.5e-30	349	407	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gC+v+k+v+r+a+d +++++tYeg+Hnh+ XP_022717669.1 349 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCSVRKQVQRCADDRTILVTTYEGNHNHP 407 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MDKGGARLSF DTADATATTA FLHPKQSLFG IDPFRKSCKP FAWKQVFMDP VDNQHVSLVQ 60 SSSSSSDGKR VVNEMDFFAN NRSSTTQVKA DDDHVKMESE HHGLVQENNE PEADINTGLN 120 LLTTNTASEK SVRDHRIITS QNQKEKQRAN QLEDVRAELE RINEENQRLR VTLNQMNSNY 180 YALQMHLGSL MQRQRNLRSA EGSEANTEMN SAIEEKRHGV AIVARQFMDL GQAAKAEKDE 240 LSESSSEGRF QELSGPPGNS IIESMERRQK NSGKNEIIPR DIPSRKDLMD PGRNQREDTP 300 EGRSHQGWLS HKVAKFNTSR DVEKAQETTA MIRKARVSVR ARSEASMISD GCQWRKYGQK 360 MAKGNPCPRA YYRCTMATGC SVRKQVQRCA DDRTILVTTY EGNHNHPLPP AAMAMASTTS 420 AAASMLLSGS MPSADGIMNS NILPKGMLPC SPNLITLSAS APFPSVTLDL TYSGPNHRPL 480 NQIHPPPPNW SHNISSLPHL LGHPIYNQPK VLGTLFTSQG TEHPHLAQNQ MQPHSMADSA 540 ATAAAITDPN FTAALVAAIT SIIGNSQRDI SGNNNNSTSS RNNGDNNNT

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MDKGGARLSF DTADATATTA FLHPKQSLFG IDPFRKSCKP FAWKQVFMDP VDNQHVSLVQ  60
SSSSSSDGKR VVNEMDFFAN NRSSTTQVKA DDDHVKMESE HHGLVQENNE PEADINTGLN  120
LLTTNTASEK SVRDHRIITS QNQKEKQRAN QLEDVRAELE RINEENQRLR VTLNQMNSNY  180
YALQMHLGSL MQRQRNLRSA EGSEANTEMN SAIEEKRHGV AIVARQFMDL GQAAKAEKDE  240
LSESSSEGRF QELSGPPGNS IIESMERRQK NSGKNEIIPR DIPSRKDLMD PGRNQREDTP  300
EGRSHQGWLS HKVAKFNTSR DVEKAQETTA MIRKARVSVR ARSEASMISD GCQWRKYGQK  360
MAKGNPCPRA YYRCTMATGC SVRKQVQRCA DDRTILVTTY EGNHNHPLPP AAMAMASTTS  420
AAASMLLSGS MPSADGIMNS NILPKGMLPC SPNLITLSAS APFPSVTLDL TYSGPNHRPL  480
NQIHPPPPNW SHNISSLPHL LGHPIYNQPK VLGTLFTSQG TEHPHLAQNQ MQPHSMADSA  540
ATAAAITDPN FTAALVAAIT SIIGNSQRDI SGNNNNSTSS RNNGDNNNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	8e-88	WRKY family protein