PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022714572.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 352aa    MW: 39705.5 Da    PI: 9.4035
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022714572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF626.9e-201765149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k ien+  r vtfskRr gi KKA+EL +LC+aev  i+fs+ gk + +
  XP_022714572.1 17 KMIENEDERLVTFSKRRSGIYKKASELATLCGAEVGFIVFSPAGKPHSF 65
                    68******************************************97776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MSGSGKKTKG RRKIEMKMIE NEDERLVTFS KRRSGIYKKA SELATLCGAE VGFIVFSPAG  60
KPHSFGHPSI ESVANRFLNE NTSPNDNTHP LVEVHHKLRI NQLRQLLNEL LSQLDAEKQK  120
AKELDQLAKR KETQGWWGAP IDPLNQQELQ ELYASFEEIR NILYSIITEK SAGATSSLLA  180
PTDPAQLTNP FTTNASEEVP ASFPPGYNHG RQQLVNFGIA KDMHDHVHDY FSYVSQYQLS  240
YFNKLLVFTA GLIADLLNRH SLVFKKLFAL FLIAGNCINV TLLSLNITLP CILVLLKSAK  300
TRNLQSKFSY QKHRFNMKIA LIFLSINDSS LRIVFAVNEF LDHISSNNND GL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-32M-type_MADS family protein