PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153294.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family CO-like
Protein Properties Length: 318aa    MW: 34682.1 Da    PI: 7.2756
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box19.71.8e-061647436
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36
                      C  +++  + l+C+ +  +lC  C  ++H g
  XP_022153294.1 16 LLCYSCKSSAAALYCRADAAFLCLRCDAQIH-G 47
                    579*****99********************9.4 PP
2zf-B_box21.74.2e-0762104339
        zf-B_box   3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 
                      + C+ +e+ ++   C+ +   lC +C   +H +       H++
  XP_022153294.1  62 VWLCEVCEHAPAAVTCNADAAALCVTCDADIH-SvnplarrHER 104
                     679*****************************.33566666765 PP
3CCT68.91.3e-23247291145
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 
                     Rea++lRY+eK+k+RkFeK+irY+sRKa+Ae RpR+KGrFvk++e
  XP_022153294.1 247 REARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE 291
                     9*****************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MQSLGAGWGV PTPTKLLCYS CKSSAAALYC RADAAFLCLR CDAQIHGPNT AKLLPATRHA  60
RVWLCEVCEH APAAVTCNAD AAALCVTCDA DIHSVNPLAR RHERSAVEPF YDSAEFAVKS  120
PTAAFKFLLS NEDDVVIPEL KSEDIFFSDM NSFIDFDYPT AGDGVVPDQS NPATVATPAT  180
DNSTANFCGL EFCTRSKFDS ISFPSQNLSQ SVSSSSLDVG VVPDRNTASD ASFPAAQTAT  240
QLRGLDREAR VLRYREKKKN RKFEKTIRYA SRKAYAEIRP RIKGRFVKRS EMNSDVDRIF  300
AGGGFPFSEG QYGVVPSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57660.15e-79CO-like family protein