PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151658.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 320aa MW: 35508.8 Da PI: 7.8478

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.7e-05	162	181	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022151658.1 162 FSCPVCFKTFNRYNNMQMHM 181 89*****************9 PP
2	zf-C2H2	15.7	4.3e-05	246	268	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ XP_022151658.1 246 FTCRKCGKAFAVRGDWRTHEKNC 268 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MADPCPNSFP NSFPNVLKFN SLRHHFPPLP PSFSPQRNMS PHNHYSYSYP TPPPPSSPPL 60 REALPLLGGL ISPPEQEQKE EEDDGGGGRG CDGSVTIALH IGLPSPSAAE MATVMSGSSS 120 EIDHGDVDHG NNHDCGQSTK TLIKGQYWIP TPSQILIGPT QFSCPVCFKT FNRYNNMQMH 180 MWGHGSQYRK GPESLRGTQP TGMLRLPCYC CAPGCRNNID HPRAKPLKDF RTLQTHYKRK 240 HGLKPFTCRK CGKAFAVRGD WRTHEKNCGK LWYCVCGSDF KHKRSLKDHV KAFGNHHAAY 300 GAGADEDDEP ASEVEQDNDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-118	C2H2 family protein