PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146000.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 498aa MW: 54956.9 Da PI: 6.791

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.7e-13	355	401	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq XP_022146000.1 355 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 401 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MGDKFWVNEE KRALLESVVG SEACEFLISL ASTNILPEVL HFPRGDLSLN QGLTQLLDGS 60 CWNYAIFWRA VGLKSGGLAL TWGDGNCHDP KKIGISSSGG DGQGEKKEEL KRQVLQMLHS 120 SFGGSDKDGC GARREEASDI QMLYLTSMYY KFMCDSTTSL GESYKSGKSI WASDVTSCLR 180 NYQSRGYLAK LAGFHTLVFV PVKSGVVELG SVKSIPEDQS VVELVKAAFG GSNTAQLKAF 240 PRIFGHELSL GGTRPLSINF SPKLEDDPKF SSEGYDLQVL GANHIFGNSS NGCRSDDNDG 300 KLFPHVNQEI VGGFSAQTRL STLEFPRDES SPQGDDRKPR KRGRKPANGR EEPLNHVEAE 360 RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAITYITDL QMKIKVMETE KQIANGRQKD 420 AEVDFQARED DAVVRVSCPL DVHPVSRVIK TFREHHIEAQ ESNVSTTDND KVIHSFSIRT 480 EGGGAEELKE KLVAALSK

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MGDKFWVNEE KRALLESVVG SEACEFLISL ASTNILPEVL HFPRGDLSLN QGLTQLLDGS  60
CWNYAIFWRA VGLKSGGLAL TWGDGNCHDP KKIGISSSGG DGQGEKKEEL KRQVLQMLHS  120
SFGGSDKDGC GARREEASDI QMLYLTSMYY KFMCDSTTSL GESYKSGKSI WASDVTSCLR  180
NYQSRGYLAK LAGFHTLVFV PVKSGVVELG SVKSIPEDQS VVELVKAAFG GSNTAQLKAF  240
PRIFGHELSL GGTRPLSINF SPKLEDDPKF SSEGYDLQVL GANHIFGNSS NGCRSDDNDG  300
KLFPHVNQEI VGGFSAQTRL STLEFPRDES SPQGDDRKPR KRGRKPANGR EEPLNHVEAE  360
RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAITYITDL QMKIKVMETE KQIANGRQKD  420
AEVDFQARED DAVVRVSCPL DVHPVSRVIK TFREHHIEAQ ESNVSTTDND KVIHSFSIRT  480
EGGGAEELKE KLVAALSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	345	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-153	bHLH family protein