PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021690842.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 267aa MW: 30902.4 Da PI: 8.6225 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94 | 6.7e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+ XP_021690842.1 9 KRIENKISRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 99.3 | 5.6e-33 | 81 | 173 | 8 | 100 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++++++ +++ e kL ++ie L+r++R+l GedL+++sl+eLq+Leqq++++lk++R++Kn+l+ ++i+elqkke++l+e+n++L+kk++e XP_021690842.1 81 ANDSEQQGNWSLECPKLMARIEILERSLRNLAGEDLDPMSLRELQHLEQQIDNGLKRVRARKNQLYNQSISELQKKERALHEQNNMLSKKVKE 173 46788899**********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MGRGRVQLKR IENKISRQVT FSKRRTGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD 60 SSMERILERY ERCSFTERQV ANDSEQQGNW SLECPKLMAR IEILERSLRN LAGEDLDPMS 120 LRELQHLEQQ IDNGLKRVRA RKNQLYNQSI SELQKKERAL HEQNNMLSKK VKENEKTMAE 180 QANWEQQNLG QNQTSFMPPP PPPPMQSLPS LTIGIRLGLT LIFSMMCYSA SGTLQTREFM 240 NEDEEAIAQI QPNTIQIPPW MLRHVNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 5e-84 | MIKC_MADS family protein |