PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690268.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 333aa MW: 36383.2 Da PI: 6.855

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0017	151	173	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H +H XP_021690268.1 151 YECKTCNRAFPSFQALGGHRASH 173 99**********99999998887 PP
2	zf-C2H2	12.4	0.00047	226	248	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg F++ L H+r+H XP_021690268.1 226 HECSVCGAEFTSGQALGGHMRRH 248 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MEAQEEVTRN NIVKGKRTKR QRVQSPIPFA NLTSNSLSGD GGGVDGDGDG DGDVCVNGKI 60 CANVSPTTSQ EFQDSTQEEE DMANCLILLA QGHINNTFKD SSPKQDDNYA AGVYNPAITA 120 IAATTTNNKF NSRKFLETGS PGSGKVGYYV YECKTCNRAF PSFQALGGHR ASHKKPKNDE 180 KKQFAISSDE EDGHFRDVSS LSLQLSNNNN NRGMYSSSNQ NKTKIHECSV CGAEFTSGQA 240 LGGHMRRHRT PIGANTRTTL SLAPMAKESE EPKKARNLLS LDLDLNLPAP ENEILSFASK 300 EQKQLQQQQQ QQPEQQQKPS LVFSGPALVD CQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	2e-53	C2H2 family protein