PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686608.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 644aa MW: 71556.3 Da PI: 9.834

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.7	4.1e-11	21	71	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqk 46 W t+E++ll++avk++G ++W+++a +++ + t+++c+ ++++ XP_021686608.1 21 TWGTWEELLLACAVKRHGFKNWDSVAMEVQtksslphLLTTAENCQQKYHD 71 7*****************************999999988899999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence
MEQHNQTQNQ SHHLTHTHSP TWGTWEELLL ACAVKRHGFK NWDSVAMEVQ TKSSLPHLLT 60 TAENCQQKYH DLHRRFTTTA TTCNEHDIQE NNNNNNNNDN NSGDKVANIP WLEELRKLRV 120 AELKQEVQRY DVSILSLQLK VKRLEEEREK SVQGNQNDDG GIPDLEQEAS QNDKKDEPEK 180 KDSVSGGEES DRENRSVNES NSTGSEQKTA EKDGVKMEAE PVQEGPCEAA PVLSVSNSKP 240 VGGGGEESHE LGDSVTQLSS EVQSSASLGR KRKRKERKRG EEIGGDGIKG ATVKSEPLIG 300 LIEMIRAHRH GSLFEGRLET QETDAYKNMV RQHLDLETIQ TKLEQGSYSS SNLSFYRDLL 360 LLVNNAIVFF PKSSTESLAA YELRLLLSNE MKKESQKSEF TVASQNIASQ PKSELERSNS 420 LLKGSAPIVV CRKRSSLSAK PSSSGYGQKI EQQQQPQQSN DTEQPSDPKP TIVEQSTMKI 480 ESKEKPATGT RSSRRTNKNL TKVTSAPSKK QNASPTTKAD ADKPETPKTD KKKTEALALD 540 KKRSAVDFLK RIKKNSPVET SKNTRGGVNG SGDKKTDGTG KVEKGKERVL RRNNDEKQEE 600 SSPSKRNVGR PSKKGAETSK VSGKRGREGS GKEAAKRPTK RSRR

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence

MEQHNQTQNQ SHHLTHTHSP TWGTWEELLL ACAVKRHGFK NWDSVAMEVQ TKSSLPHLLT  60
TAENCQQKYH DLHRRFTTTA TTCNEHDIQE NNNNNNNNDN NSGDKVANIP WLEELRKLRV  120
AELKQEVQRY DVSILSLQLK VKRLEEEREK SVQGNQNDDG GIPDLEQEAS QNDKKDEPEK  180
KDSVSGGEES DRENRSVNES NSTGSEQKTA EKDGVKMEAE PVQEGPCEAA PVLSVSNSKP  240
VGGGGEESHE LGDSVTQLSS EVQSSASLGR KRKRKERKRG EEIGGDGIKG ATVKSEPLIG  300
LIEMIRAHRH GSLFEGRLET QETDAYKNMV RQHLDLETIQ TKLEQGSYSS SNLSFYRDLL  360
LLVNNAIVFF PKSSTESLAA YELRLLLSNE MKKESQKSEF TVASQNIASQ PKSELERSNS  420
LLKGSAPIVV CRKRSSLSAK PSSSGYGQKI EQQQQPQQSN DTEQPSDPKP TIVEQSTMKI  480
ESKEKPATGT RSSRRTNKNL TKVTSAPSKK QNASPTTKAD ADKPETPKTD KKKTEALALD  540
KKRSAVDFLK RIKKNSPVET SKNTRGGVNG SGDKKTDGTG KVEKGKERVL RRNNDEKQEE  600
SSPSKRNVGR PSKKGAETSK VSGKRGREGS GKEAAKRPTK RSRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	270	275	RKRKRK
2	270	276	RKRKRKE
3	270	278	RKRKRKERK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	1e-117	MYB_related family protein