PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021684713.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 177aa    MW: 20374.7 Da    PI: 8.6063
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021684713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.32.1e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien   rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgkl+e+ss
  XP_021684713.1  9 KRIENANSRQVTFSKRRAGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSS 59
                    79***********************************************96 PP
2K-box70.55.1e-2481170998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     +e + +++ ++e++ Lk+ei +Lq +  +llG+dL+ LslkeLq+Leq+L+++l  +++kK++ll+eq+e+++ +e+++  en++Lr++ 
  XP_021684713.1  81 VECEAEKQDSREVDVLKEEIAKLQAKELRLLGQDLTGLSLKELQHLEQKLNEGLLCVKEKKEHLLMEQLEQSRVQEQRAMLENETLRRQC 170
                     5556678899*****************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KAQELAILCD AEVAVIIFSN TGKLFEFSSS  60
GMKRTLSRYN KCLDSPEPTR VECEAEKQDS REVDVLKEEI AKLQAKELRL LGQDLTGLSL  120
KELQHLEQKL NEGLLCVKEK KEHLLMEQLE QSRVQEQRAM LENETLRRQC KFLLLVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.13e-69MIKC_MADS family protein