PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021684191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 28327.5 Da PI: 8.4574 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.4 | 2.9e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+ XP_021684191.1 9 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 107.2 | 2e-35 | 78 | 174 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ ++++ +e+++ e+++Lk+++e Lqr++Rh++Ged++sLslkeLq+LeqqL+++lk+iR +Kn+l++e+i+elqkkek++qe+n +L k++ XP_021684191.1 78 RQLTATDLISQENWTLEYNRLKAKVELLQRNHRHYMGEDIDSLSLKELQNLEQQLDTALKHIRIRKNQLMYESISELQKKEKAIQEQNSMLAKQI 172 555555666789**********************************************************************************9 PP K-box 99 ee 100 +e XP_021684191.1 173 KE 174 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALIVFSH KGKLFEYSTD 60 SCMEKILERY ERYSYAERQL TATDLISQEN WTLEYNRLKA KVELLQRNHR HYMGEDIDSL 120 SLKELQNLEQ QLDTALKHIR IRKNQLMYES ISELQKKEKA IQEQNSMLAK QIKEKEKAVA 180 QQVLWEQHNH GTNMSPFLLP QPPLPCLNIG GNYQEEAPEV RRNELDLTLE PIYSCHLGCF 240 TS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-124 | MIKC_MADS family protein |