PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021682788.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 226aa MW: 26204.7 Da PI: 9.3052 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.8 | 7.7e-30 | 11 | 60 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+ey XP_021682788.1 11 KRIENSTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYV 60 79***********************************************7 PP | |||||||
2 | K-box | 87.3 | 2.9e-29 | 73 | 171 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk+ g++ ++ ++e++++ l++Lk+ + nL+re+R+++Ge+L++Ls+++L+ Leq+++++l+ iR++Kn+++ +qi + kk ++++e+ ++L XP_021682788.1 73 YQKTLGVDIWSPQYEKMNETLKRLKEVNGNLRREIRQRMGECLNDLSFENLRGLEQDMDTALNLIRERKNRVIANQIVTWNKKLRNAEERYRNLL 167 78999999**************************************************************************************9 PP K-box 96 kkle 99 ++le XP_021682788.1 168 HELE 171 9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MGMARGKIQI KRIENSTNRQ VTYSKRRNGL FKKANELTVL CDAKVSIIMF SSTGKLHEYV 60 SPSTSTKQMF DQYQKTLGVD IWSPQYEKMN ETLKRLKEVN GNLRREIRQR MGECLNDLSF 120 ENLRGLEQDM DTALNLIRER KNRVIANQIV TWNKKLRNAE ERYRNLLHEL EARDHEDPHY 180 GLVDNGSVFG FENEDPSSIF VLRLQSNHPN LHSGAGSDLS TYPLLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 3e-90 | MIKC_MADS family protein |