PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021681523.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CO-like

Protein Properties

Length: 368aa MW: 40692.7 Da PI: 6.1042

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021681523.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.8	3.8e-07	19	59	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +r+C+ ++ + fC+ ++ +lC +C +++H H XP_021681523.1 19 ARCCDFCKTATAAVFCRADSAFLCLNCDTKIHAAnklvsrH 59 689*****************************654555555 PP
2	zf-B_box	25.1	3.5e-08	62	107	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ C+ + lC +C +H H++vp+ XP_021681523.1 62 IWMCEVCEQAPAAVNCKADAAALCVTCDADIHLAnplarrHERVPV 107 589*****************************55577777999986 PP
3	CCT	69.6	8e-24	295	339	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k+ae XP_021681523.1 295 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRAE 339 9*****************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MAVHVQSVEN LTSRWTVAAR CCDFCKTATA AVFCRADSAF LCLNCDTKIH AANKLVSRHE 60 RIWMCEVCEQ APAAVNCKAD AAALCVTCDA DIHLANPLAR RHERVPVEPF FDSAESIVKS 120 SPFNFLVPSD QNGISAGYHQ NHEDDVEGVS WLLPNPTNLN SKLGLENPEM KADGDLYFPE 180 MEPLLDMEFQ QSHSGATDSV VPVQTKPASI PVINNDICYD VDFCRSKLSS SNYPTQSLSQ 240 SVSSSSLDVG VVPDGNSMSD ISYPFGRNLN TGTDPIASIS TSTTNQTAQM CGIDREARVL 300 RYREKRKNRK FEKTIRYASR KAYAETRPRI KGRFAKRAEI ESDMDRLYNS PSSVSFVSDA 360 QYGVVPSF

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MAVHVQSVEN LTSRWTVAAR CCDFCKTATA AVFCRADSAF LCLNCDTKIH AANKLVSRHE  60
RIWMCEVCEQ APAAVNCKAD AAALCVTCDA DIHLANPLAR RHERVPVEPF FDSAESIVKS  120
SPFNFLVPSD QNGISAGYHQ NHEDDVEGVS WLLPNPTNLN SKLGLENPEM KADGDLYFPE  180
MEPLLDMEFQ QSHSGATDSV VPVQTKPASI PVINNDICYD VDFCRSKLSS SNYPTQSLSQ  240
SVSSSSLDVG VVPDGNSMSD ISYPFGRNLN TGTDPIASIS TSTTNQTAQM CGIDREARVL  300
RYREKRKNRK FEKTIRYASR KAYAETRPRI KGRFAKRAEI ESDMDRLYNS PSSVSFVSDA  360
QYGVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-120	CO-like family protein