PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673716.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 1116aa MW: 123483 Da PI: 9.4803

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673716.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.6	4.6e-11	54	90	3	41
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 rW++eE +++++a + +G + Wk+Ia++++ +R+ +++k XP_021673716.1 54 RWSEEELQQFYKAYRVHGVE-WKKIAAEVP-NRSVEMVK 90 9*****************.*****.***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1116 aa Download sequence
MWILNKTSMA PTRKKSVNKR FLNEVSPHKE VRNPNKNKER VIGKRRLSDK LGPRWSEEEL 60 QQFYKAYRVH GVEWKKIAAE VPNRSVEMVK TLFKMNKAYL SLPEGTASVV GLTAMMTDHY 120 YSHEVSDSEG ESNDVPGMSQ KPQKSKQAKI QLSASKDLQQ SRSIASTDGY LSLLKKGQFY 180 GGQPRAVGKR TPRIAVSYPY KKNDSENYVS QKKGQKSEND VNDDGVHVAA LALAEALQKG 240 GSPQVSPTQC RRTEHIKSSP VRSWDMMSKS SHSKLQDAFV DEELMGDGIS RGADSGAYAR 300 DASSLVDMEG VGTVEVHPKG NKFYRKKVKV EERGNCQSDD GGEACSGTEE GPKINALKGK 360 TDIDESNAKT DERSPQARKK ISGKHFSGDE FSALDALQTL ANLSVMESES SVQLNEERML 420 LSVDDKFSKP EAISTSHHRD KLLGYREKVF HPRSEVEGAS RKSKLGRNTA TKPVSKPKQG 480 LQSINNNINA LKRKRHSLVS KVPNAEAPIN LHLSKPLEAE PVDEEEIISA LKGKRTCLVS 540 AVSKQLKATG LSAGSVSGDQ KSSASDVAIS TAQVPVASQV TLPTSKISRR KMSLKQSFIH 600 KEGHSSENIL KNQANRYSIS LQDTAPFLKG KFSSCLSSPM VRRWCTFEWF YSAIDYPWFA 660 KREFVEYLNH VGLGHIPRLT RVEWGVIRSS LGKPRRFSEH FLHEEREKLK QYRDSVRKHY 720 TELRTGIMDG LPTDLARPLS VGQRVIAVHP KTRELHDGSV LTIDHDRCRV QFDCPEMGVE 780 FVKDIDCMPS NPFDNMPEAL RRGRFSVASK ELQVNGHSHI GGFTSPRRLD NLRIPMNTLV 840 KQVDANHQQS KAASIDIVNA QQIASQPSVV SQLEVKEADV QALSELNHAL DKKASSALVN 900 LRQHNTCPGN TLPPWLKPPV NSNFLAGPPS SHDIFVSQES GSSTVIEIVG GSRHKAHTMI 960 DAAVQAISSM KEGEDAFVKI GEALDSIDKG QLASEPKAQV IRSPEHVNGI LNDHDQLISS 1020 TLEAQVNGNA SGPKSQNNAD KIEAAIPEEL ITSCVATLLM IQTCTERQYP PADVAQIIDS 1080 AVTSLHPYCP QNQPIYREIQ MCMGRIKTQI LALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1116 aa Download sequence

MWILNKTSMA PTRKKSVNKR FLNEVSPHKE VRNPNKNKER VIGKRRLSDK LGPRWSEEEL  60
QQFYKAYRVH GVEWKKIAAE VPNRSVEMVK TLFKMNKAYL SLPEGTASVV GLTAMMTDHY  120
YSHEVSDSEG ESNDVPGMSQ KPQKSKQAKI QLSASKDLQQ SRSIASTDGY LSLLKKGQFY  180
GGQPRAVGKR TPRIAVSYPY KKNDSENYVS QKKGQKSEND VNDDGVHVAA LALAEALQKG  240
GSPQVSPTQC RRTEHIKSSP VRSWDMMSKS SHSKLQDAFV DEELMGDGIS RGADSGAYAR  300
DASSLVDMEG VGTVEVHPKG NKFYRKKVKV EERGNCQSDD GGEACSGTEE GPKINALKGK  360
TDIDESNAKT DERSPQARKK ISGKHFSGDE FSALDALQTL ANLSVMESES SVQLNEERML  420
LSVDDKFSKP EAISTSHHRD KLLGYREKVF HPRSEVEGAS RKSKLGRNTA TKPVSKPKQG  480
LQSINNNINA LKRKRHSLVS KVPNAEAPIN LHLSKPLEAE PVDEEEIISA LKGKRTCLVS  540
AVSKQLKATG LSAGSVSGDQ KSSASDVAIS TAQVPVASQV TLPTSKISRR KMSLKQSFIH  600
KEGHSSENIL KNQANRYSIS LQDTAPFLKG KFSSCLSSPM VRRWCTFEWF YSAIDYPWFA  660
KREFVEYLNH VGLGHIPRLT RVEWGVIRSS LGKPRRFSEH FLHEEREKLK QYRDSVRKHY  720
TELRTGIMDG LPTDLARPLS VGQRVIAVHP KTRELHDGSV LTIDHDRCRV QFDCPEMGVE  780
FVKDIDCMPS NPFDNMPEAL RRGRFSVASK ELQVNGHSHI GGFTSPRRLD NLRIPMNTLV  840
KQVDANHQQS KAASIDIVNA QQIASQPSVV SQLEVKEADV QALSELNHAL DKKASSALVN  900
LRQHNTCPGN TLPPWLKPPV NSNFLAGPPS SHDIFVSQES GSSTVIEIVG GSRHKAHTMI  960
DAAVQAISSM KEGEDAFVKI GEALDSIDKG QLASEPKAQV IRSPEHVNGI LNDHDQLISS  1020
TLEAQVNGNA SGPKSQNNAD KIEAAIPEEL ITSCVATLLM IQTCTERQYP PADVAQIIDS  1080
AVTSLHPYCP QNQPIYREIQ MCMGRIKTQI LALIPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein