PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021672901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 234aa MW: 27199.9 Da PI: 9.9572 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.9 | 8.4e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+ XP_021672901.1 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 105.4 | 7e-35 | 76 | 174 | 2 | 100 |
K-box 2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 ++++ ++++++++ s++ e+ kLk+++e Lqr+qRh++G dL++LslkeLq+Leqq++++lk+iRs+Kn+l++e+i elqkk k+lqe+n++L k XP_021672901.1 76 AERQLVATDTETNGSWTLEYVKLKARLEVLQRNQRHFMGRDLDTLSLKELQSLEQQIDSALKHIRSRKNQLMYESIAELQKKDKALQEQNNQLAK 170 66777788889999********************************************************************************* PP K-box 97 klee 100 k++e XP_021672901.1 171 KVKE 174 *986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD 60 SSMERILERY ERYSYAERQL VATDTETNGS WTLEYVKLKA RLEVLQRNQR HFMGRDLDTL 120 SLKELQSLEQ QIDSALKHIR SRKNQLMYES IAELQKKDKA LQEQNNQLAK KVKEKEKEMA 180 QQTQMEQQNH GVDSSTVTAQ SLNIRGNRGE DETTPIQHRG NAILPAWMLP HLNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 6e-89 | MIKC_MADS family protein |