PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672265.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARR-B

Protein Properties

Length: 668aa MW: 72029.1 Da PI: 6.3957

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.5	3e-28	224	277	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl XP_021672265.1 224 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 277 79*****************.******************************8 PP
2	Myb_DNA-binding	40.2	7.7e-13	226	276	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ XP_021672265.1 226 RVVWSVELHQQFVSAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 276 678**********************************************97 PP
3	Response_reg	74.6	3.9e-25	40	148	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+q+l++ y v+++++++ al+ll+e++ +D++l D+ mp+mdG++ll++ e +lp+i+++a g + + + ++ G XP_021672265.1 40 VLVVDDDITCLRILEQMLRRCLY-LVTTCSQAKVALNLLRERKgcFDVVLSDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADGRTSAVMRGIRHG 132 89*******************.***************************************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_021672265.1 133 ACDYLIKPIREEELKN 148 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MAALQRVASS VSATASNYGS CKGAAADAVV SDQFPAGLRV LVVDDDITCL RILEQMLRRC 60 LYLVTTCSQA KVALNLLRER KGCFDVVLSD VHMPDMDGFK LLEHVGLEMD LPVIMMSADG 120 RTSAVMRGIR HGACDYLIKP IREEELKNIW QHVVRKKWNE NKELEHSGSL EDSDRNKRGN 180 DDAEYTSSVN EGTEGVLKGQ KKRSNSKDED DGDPENDDPS TSKKPRVVWS VELHQQFVSA 240 VNQLGIDKAV PKRILELMNV PGLTRENVAS HLQKFRLYLK RLSGVSQQGG ISNAFCGPLD 300 SNVKLNALGR FDIQALAASG QIPPQTLAAL HAELLGRPAG SLVTTVDQPA LLQASIQGPK 360 CIPVEHGVAF GQPLVKCQSN ISKPFPQNMV SVEEVASKFG AWPSNSLSIV GPNTNLGGMG 420 SQNGNMLMDI LHQQQQQQQQ HHQQPQQSSL SEPGLSINVQ PSCLVVPSQS SASFQAGNSP 480 ASVNQSCNFN RNAVIDYSLL SSQSNNSSLN IGHVPDGNLK TTVVVSGYSV PGTISPSASS 540 SSVNADSGIN RQFQNSTITF GAARHLPGLA SNICDVQGSY GAKSGEVLDQ GPLRYLGFVG 600 KGTFLPSQFS VDEFTAPISN LSQGKTYVEN NGSKVKQEPN MEFTDDARVG VSVLQQFPPN 660 DLMSVFTE

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MAALQRVASS VSATASNYGS CKGAAADAVV SDQFPAGLRV LVVDDDITCL RILEQMLRRC  60
LYLVTTCSQA KVALNLLRER KGCFDVVLSD VHMPDMDGFK LLEHVGLEMD LPVIMMSADG  120
RTSAVMRGIR HGACDYLIKP IREEELKNIW QHVVRKKWNE NKELEHSGSL EDSDRNKRGN  180
DDAEYTSSVN EGTEGVLKGQ KKRSNSKDED DGDPENDDPS TSKKPRVVWS VELHQQFVSA  240
VNQLGIDKAV PKRILELMNV PGLTRENVAS HLQKFRLYLK RLSGVSQQGG ISNAFCGPLD  300
SNVKLNALGR FDIQALAASG QIPPQTLAAL HAELLGRPAG SLVTTVDQPA LLQASIQGPK  360
CIPVEHGVAF GQPLVKCQSN ISKPFPQNMV SVEEVASKFG AWPSNSLSIV GPNTNLGGMG  420
SQNGNMLMDI LHQQQQQQQQ HHQQPQQSSL SEPGLSINVQ PSCLVVPSQS SASFQAGNSP  480
ASVNQSCNFN RNAVIDYSLL SSQSNNSSLN IGHVPDGNLK TTVVVSGYSV PGTISPSASS  540
SSVNADSGIN RQFQNSTITF GAARHLPGLA SNICDVQGSY GAKSGEVLDQ GPLRYLGFVG  600
KGTFLPSQFS VDEFTAPISN LSQGKTYVEN NGSKVKQEPN MEFTDDARVG VSVLQQFPPN  660
DLMSVFTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-125	ARR-B family protein