PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021666582.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 25588.4 Da PI: 4.8301 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.6e-17 | 55 | 105 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr + ++Wv+e+r+p +k+ r++lg+f t+e+Aa+a++ a+++l+g XP_021666582.1 55 PVFRGVRKRN-GNKWVCELREP---NKKSRIWLGTFPTPEMAARAHDVAALALRG 105 579****887.9*********8...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MDSQPFYSSQ ESSSPSDASS TTAAHSNSDE EVPLLASSRP KKRAGRRIFK ETRHPVFRGV 60 RKRNGNKWVC ELREPNKKSR IWLGTFPTPE MAARAHDVAA LALRGKSACL NFADSAWRAL 120 PVPASLDARE IRRAAKEAAE LFPTQEFEDG GQITVQGSNI VEDSSEDCSN ECKTFQENAL 180 FIDEEEVFDT PRLLVEMAQG LLLSPPHFDA DATEPNRWET DVDISLWSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 9e-47 | ERF family protein |