PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021663474.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 325aa MW: 35636.3 Da PI: 8.0262

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021663474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00075	144	166	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_021663474.1 144 YECKTCNRTFPSFQALGGHRASH 166 99**********99999998887 PP
2	zf-C2H2	13.2	0.00027	221	243	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H XP_021663474.1 221 HECSICGAEFTSGQALGGHMRRH 243 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MEAQEEVTNS NIVKGKRTKR QSVQSPIPHA NSSSGDGDGD GDGYDCGDFC TNGKIFTNRS 60 PITSQELQDS TQEEEDMANC LILLAQGHIN KHSSPKQDNN DAAGVYKPTT AAVITTTTTT 120 NKFNSRRFLE TGSPGSSKAG YYVYECKTCN RTFPSFQALG GHRASHKKPK NDEKKQFAVS 180 SNEDGHFRDI SSLSLQLSHN NNNNNNRVIY SSSGQNKAKI HECSICGAEF TSGQALGGHM 240 RRHRAPIGAN NSTTLSLTPI AIESEEPKKA RKLLSLNLDL NLPAQEDEIL SFASKKQKQQ 300 QQQQQEQQQK PSLVFSGPAL VDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	1e-55	C2H2 family protein