PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021661477.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 170aa    MW: 20055.1 Da    PI: 10.5265
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021661477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.64.6e-301160150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+ey 
  XP_021661477.1 11 KRIENSTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYV 60
                    79***********************************************7 PP
2K-box86.94.1e-2973169197
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yqk+ g++ ++ ++e++++ l++Lk+ + nL+re+R+++Ge+L++Ls+++L+ Leq+++++l+ iR++Kn+++ +qi +  kk ++++e+ ++L 
  XP_021661477.1  73 YQKTLGVDIWSPQYEKMNETLKRLKEVNGNLRREIRQRMGECLNDLSFENLRGLEQDMDTALNLIRERKNRVIANQIVTWNKKLRNAEERYRNLL 167
                     78999999**********************************************************************************99998 PP

           K-box  96 kk 97 
                     ++
  XP_021661477.1 168 HE 169
                     76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MGMARGKIQI KRIENSTNRQ VTYSKRRNGL FKKANELTVL CDAKVSIIMF SSTGKLHEYV  60
SPSTSTKQMF DQYQKTLGVD IWSPQYEKMN ETLKRLKEVN GNLRREIRQR MGECLNDLSF  120
ENLRGLEQDM DTALNLIRER KNRVIANQIV TWNKKLRNAE ERYRNLLHEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.12e-73MIKC_MADS family protein