PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658017.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 332aa MW: 37651.4 Da PI: 8.3226

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.1	3.4e-06	173	192	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r nL+ H+ XP_021658017.1 173 FSCPVCFKTFNRYNNLQMHM 192 89*****************9 PP
2	zf-C2H2	15.7	4.2e-05	257	279	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F k + ++H +++ XP_021658017.1 257 FMCRKCGKPFAVKGDWRTHEKNC 279 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MADPCSNLFT GWFNFMPTHS HYTTAFTPYS NRSPYSFNLY SNNHIFNNRS SIQYQTYYPP 60 PPPQKESPPP PPPLIEYLCP SRQQEENHES SSNSMEEDRN INKKYDGGGE TVTVALHIGL 120 TSPSSDLGSR VCSHPSTEEG SSAVSGGYPL QKLIKGQYWI PTPSQILIGP TQFSCPVCFK 180 TFNRYNNLQM HMWGHGSQYR KGPDSLRGTQ PTGMLRLPCF CCAPGCKHNI DHPRARPLKD 240 FRTLQTHYKR KHGIKPFMCR KCGKPFAVKG DWRTHEKNCG KIWYCICGSD FKHKRSLKDH 300 IKAFGNGHAV LGIDSLEEEE ELASEHDEES SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-118	C2H2 family protein