PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021649956.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 669aa MW: 74102.1 Da PI: 7.1725

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021649956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.8e-16	322	381	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021649956.1 322 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 381 78*****************988886678446***********************98 PP
2	AP2	45.6	1.7e-14	426	475	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_021649956.1 426 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 475 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MKSMNNDDDN NNNGSWLGFS LSPHHMKMDV PSGPSNHHHQ AQAESGSASV PTAIPTSLFY 60 SQSHSHLNYG SYCGVEGENC GLYSPLPVMP LKSDGSLCMM EALTRSQPQA TMVTTSTPKL 120 EDFFGGATMG SHHYGTNHRE AMALSLDSMY YHPDPDHHPN NQTCLNHLQQ NPRHQQHYPY 180 FNTNFRSYEM LVGDEPKETQ QVSDCSPQLP TIGDDGINGT RNWDSRNYPT NHAMDQQKMV 240 SCMGDNGGES GAINSIAYGD FQSLSLSMSP GSQSSCVTGS QQISSAVTDC AAMETKKRGP 300 DKVDQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ SRKGRQVYLG 360 GYDMEEKAAR AYDLAALKYW GPSTHINFPL ENYQKEIEEM NNMTRQEYVA HLRRKSSGFS 420 RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGVNAVT 480 NFGITRYDVE RIMASNTLLA GELARRNKDI GSSNEATNHN HATQNSVGEA IPSLKNNESD 540 YKMVLYQSSQ QPTNVIGNYK TQAFSLAPEN VIGIDAMSPV HHKDVEDSTK MGTHLSNASS 600 RVTSLGSSRE GSPERASLPM VFAMPPSGTS NMFTNPTNNV NSWIPTAQLR PVVSLPHMPV 660 FAAWTDGIG

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MKSMNNDDDN NNNGSWLGFS LSPHHMKMDV PSGPSNHHHQ AQAESGSASV PTAIPTSLFY  60
SQSHSHLNYG SYCGVEGENC GLYSPLPVMP LKSDGSLCMM EALTRSQPQA TMVTTSTPKL  120
EDFFGGATMG SHHYGTNHRE AMALSLDSMY YHPDPDHHPN NQTCLNHLQQ NPRHQQHYPY  180
FNTNFRSYEM LVGDEPKETQ QVSDCSPQLP TIGDDGINGT RNWDSRNYPT NHAMDQQKMV  240
SCMGDNGGES GAINSIAYGD FQSLSLSMSP GSQSSCVTGS QQISSAVTDC AAMETKKRGP  300
DKVDQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ SRKGRQVYLG  360
GYDMEEKAAR AYDLAALKYW GPSTHINFPL ENYQKEIEEM NNMTRQEYVA HLRRKSSGFS  420
RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGVNAVT  480
NFGITRYDVE RIMASNTLLA GELARRNKDI GSSNEATNHN HATQNSVGEA IPSLKNNESD  540
YKMVLYQSSQ QPTNVIGNYK TQAFSLAPEN VIGIDAMSPV HHKDVEDSTK MGTHLSNASS  600
RVTSLGSSRE GSPERASLPM VFAMPPSGTS NMFTNPTNNV NSWIPTAQLR PVVSLPHMPV  660
FAAWTDGIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-156	AP2 family protein