PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648843.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 358aa MW: 40480.1 Da PI: 6.5605

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00048	281	303	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C+k F + + ++H +++ XP_021648843.1 281 FMCRKCSKAFAVRGDWRTHEKNC 303 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MADPYSNFFT GWFKFNNNPL YHQYPSLNPT PASTNPQLSY TNPFTTNQIQ TPYFHCQNRP 60 PSPPLREALP LLRLSPERDA EKDQEQEDED EDQEQISCTA MDVDKINNNK AKVDHGSFFS 120 SNADAGATNE DETVTVALHI GLPSPSAAEM ASVLSSSSEV TDKDGDGDDS GFPFSRLNKG 180 QYWIPTPTQI LIGPTQFSCP VCCKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR 240 LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYRRKHGIKP FMCRKCSKAF AVRGDWRTHE 300 KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHAAYGIDGF EEEDEPASEV EQDNESMQ

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MADPYSNFFT GWFKFNNNPL YHQYPSLNPT PASTNPQLSY TNPFTTNQIQ TPYFHCQNRP  60
PSPPLREALP LLRLSPERDA EKDQEQEDED EDQEQISCTA MDVDKINNNK AKVDHGSFFS  120
SNADAGATNE DETVTVALHI GLPSPSAAEM ASVLSSSSEV TDKDGDGDDS GFPFSRLNKG  180
QYWIPTPTQI LIGPTQFSCP VCCKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR  240
LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYRRKHGIKP FMCRKCSKAF AVRGDWRTHE  300
KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHAAYGIDGF EEEDEPASEV EQDNESMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-138	C2H2 family protein