PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648102.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 349aa MW: 39588.6 Da PI: 4.9094

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.5	1.5e-27	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k+ien++nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++g+l +s XP_021648102.1 9 KKIENNTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFS 58 68********************************************9997 PP
2	K-box	26.9	2.1e-10	129	197	11	79
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqiee 79 +++ e+lq+e+a L+++++ ++++R + + L+ s+ eL++ e++L + l+++ ++K+ ll +qi + XP_021648102.1 129 NSDVEELQHEVASLQQQLQIAEEQIRIYEPDPLKISSMGELESCEKNLVDTLTSVMQRKEYLLSNQIAY 197 67889*************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MGRVKLEIKK IENNTNRQVT FSKRRNGLIK KAYELSILCD IDIALIMFSP SGRLSHFSGK 60 KRIEDVFARY VNLPDQEREH AIYPEHSRHP DFQSKEFSFV LLQYLLRTLQ QLKSENDIAL 120 QLANPTAINS DVEELQHEVA SLQQQLQIAE EQIRIYEPDP LKISSMGELE SCEKNLVDTL 180 TSVMQRKEYL LSNQIAYDPS SMQQGMATSF EDEVIGWMPD GGQSHTHIFD TSASLNNLRD 240 LSSTMYDPLL QGSSSNREAQ SMAECHVTNP NDHNNFSTWP QPYSSATALH SNPMPAPSLY 300 PQLQPGMMGP NIPEMMPREQ MDIPISGPHL QLENEAANFD NKIPQLNGQ

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MGRVKLEIKK IENNTNRQVT FSKRRNGLIK KAYELSILCD IDIALIMFSP SGRLSHFSGK  60
KRIEDVFARY VNLPDQEREH AIYPEHSRHP DFQSKEFSFV LLQYLLRTLQ QLKSENDIAL  120
QLANPTAINS DVEELQHEVA SLQQQLQIAE EQIRIYEPDP LKISSMGELE SCEKNLVDTL  180
TSVMQRKEYL LSNQIAYDPS SMQQGMATSF EDEVIGWMPD GGQSHTHIFD TSASLNNLRD  240
LSSTMYDPLL QGSSSNREAQ SMAECHVTNP NDHNNFSTWP QPYSSATALH SNPMPAPSLY  300
PQLQPGMMGP NIPEMMPREQ MDIPISGPHL QLENEAANFD NKIPQLNGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22130.1	1e-122	MIKC_MADS family protein