PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021645793.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 544aa MW: 59876.8 Da PI: 6.6834 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.1 | 1.2e-14 | 167 | 225 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021645793.1 167 IFRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 225 69******************666664477446*************************98 PP | |||||||
2 | AP2 | 47.1 | 5.9e-15 | 270 | 319 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_021645793.1 270 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 319 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 544 aa Download sequence |
MNSNNWLSFP LSPTHSSLPN HLHAPHPQQF SLGLVTENLD NPFQTQEWSL INTQGGSEVP 60 KVADFLGVTK SENQSDLVAF NEIQANVSDY MFPGNSLVPV QNTVLAASGN YEFPENANNL 120 QSLTLSMGGA SGKVSSTCET SGDTSTNTVE AATPRRTLDT FGQRTSIFRG VTRHRWTGRY 180 EAHLWDNSCR REGQSRKGRQ VYLGGYDKEE KAARAYDLAA LKYWGTSTTT NFPISNYEKE 240 LEEMKHMTRQ EFVASIRRKS SGFSRGASMY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF 300 STEEEAAEAY DIAAIKFRGL NAVTNFDMNR YDVKSILESN TLPIGGGAAK RLKEAQAIES 360 SRKREEMIAL GSGFQYGSSS SSRLQAYSLT QAPFEQPQPL LTLQNQDISQ YAQDASFHQN 420 FLQTQLHLHQ QSAGTNYLQQ SSQNPQFYNS YIQNNPALLH GLFNMGSSSS IMEHNGSSSG 480 SYSGGYLGNG LGIASNSSGS NVVGSAEEVA FVKVDYDMPS ASYGSWSGDS VQGSNPGLFT 540 MWND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G51190.1 | 0.0 | AP2 family protein |