PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021645103.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 847aa    MW: 92877.9 Da    PI: 6.1396
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021645103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.32.6e-181977357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_021645103.1 19 KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 77
                    6789*****************************************************97 PP
2START176.51.6e-551683762205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++  ++l vi +g  g+++lm
  XP_021645103.1 168 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRPSWFRDCRCLDILSVIPTGngGTIELM 261
                     68999*****************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf++vRy+ +l++g++vi+++S++  +  p+    ss+vRae+lpSg li+p+++g+s +++v+hvdl++++++++lr+l+
  XP_021645103.1 262 YMQTYAPTTLAAaRDFWTVRYTTTLEDGSLVICERSLTIATGGPTgppASSFVRAEMLPSGHLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLY 356
                     ***************************************999998899*********************************************** PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+ + ++k+++a+l++ ++
  XP_021645103.1 357 ESSKILAQKMTMAALRHVRQ 376
                     ***************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 847 aa     Download sequence    
MALSMHNKEG NNKQMDTSKY VRYTPEQVEA LERVYTECPK PSSLRRQQLI RECPILSNIE  60
PKQIKVWFQN RRCREKQRKE ASRLQTVNRK LTAMNKLLME ENDRLQKQVT QLVYENGYMR  120
QQLQNASATT TDNSCESVVV SGQQQQQQNP TPQHPQRDAN NPAGLLAIAE ETLAEFLSKA  180
TGTAVDWVQM IGMKPGPDSI GIVAVSRNCS GVAARACGLV SLEPTKVAEI LKDRPSWFRD  240
CRCLDILSVI PTGNGGTIEL MYMQTYAPTT LAAARDFWTV RYTTTLEDGS LVICERSLTI  300
ATGGPTGPPA SSFVRAEMLP SGHLIRPCEG GGSIIHIVDH VDLDAWSVPE VLRPLYESSK  360
ILAQKMTMAA LRHVRQIAQE TSGEIQYGGG RQPAVLRTFS QRLCRGFNDA VNGFADDGWS  420
LLGGDGVEDV TIVINSSPNK ILGSQYNASM FPTFGGGVLC AKASMLLQNV PPALLVRFLR  480
EHRSEWADYG VDTYSAACLK ASPYAVPCAR PGGFPCSQVI LPLAYTVEHE EFLEVVRLEG  540
HAFSPEDVAL ARDMYLLQLC SGVDENAVGA CAQLVFAPID ESFADDAPLL PSGFRVIPLD  600
PKTDGPAATR TLDLASTLEV GAGGARPSSE ADANNCNLRS VLTIAFQFTF ENHLRDNVAA  660
MARQYVRSVV GSVQRVAMAI SPSWLSSHPG PKSLAGSPEA LTLARWIYRS YRIHTGGDLF  720
QVDSQAGDAL LKQLWHHSDA IMCCSLKTNA SPVFTFANQA GLDLLETTLV ALQDIMLDKI  780
LDEAGRKILC SEFSKIMQQG FAYLPAGVCV SSMGRPVSYD QAIAWKVLND DDSNHCLAFM  840
FMNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein