PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021642714.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 217aa MW: 24988.6 Da PI: 8.6181 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.6 | 2.2e-30 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++gklye++ XP_021642714.1 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFA 58 79***********************************************8 PP | |||||||
2 | K-box | 83.1 | 6.1e-28 | 79 | 170 | 6 | 97 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++++++++e l++e+a++ k+ie L+ ++R+llGe+L+s++++eLqq+eqqLe+s+++iR++Kn++++eqie+l++ke +l en +L++k XP_021642714.1 79 DEKKSDENMELLKTEAANMVKKIELLEISKRKLLGEGLDSCTVEELQQIEQQLERSVSSIRARKNQVFKEQIERLKEKESQLAAENARLSEK 170 4458999**********************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIVFSP RGKLYEFANS 60 SMQETIERYR RHVKDNQIDE KKSDENMELL KTEAANMVKK IELLEISKRK LLGEGLDSCT 120 VEELQQIEQQ LERSVSSIRA RKNQVFKEQI ERLKEKESQL AAENARLSEK CGVQPWEGLK 180 VVGETRYCEE SSLVSDVETE LFIGLPETRT KGHPPRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-84 | MIKC_MADS family protein |