PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638673.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 348aa MW: 38796.2 Da PI: 8.08

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.4e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl XP_021638673.1 14 KGPWSPEEDSKLKEYIEKFGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.6	2.5e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_021638673.1 69 GEFSDEEDRIICTLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KFGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDEEDRIIC TLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLRKKLMAM 120 ASQSQRKPLP FPSPHHHQSP PLSYQSLLSI YNDSSAAAYP CCPAATAKPF STGFEPISPI 180 PSNILANNSS TLATNPSSLF QTQEGWSPLQ YHHPVKENNN TNNNNGSNLL VFGSEASCSS 240 NSDGSCSQIS YGGGREIKQE DMGFQGYISN GYEKNHKFML SYGNNSVNGS GNLNQWAEKA 300 TGYFGETPPL EYDLEDVKQL ISSSSNNSCN NNFLIDENKT QERFMYYY

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KFGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSDEEDRIIC TLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLRKKLMAM  120
ASQSQRKPLP FPSPHHHQSP PLSYQSLLSI YNDSSAAAYP CCPAATAKPF STGFEPISPI  180
PSNILANNSS TLATNPSSLF QTQEGWSPLQ YHHPVKENNN TNNNNGSNLL VFGSEASCSS  240
NSDGSCSQIS YGGGREIKQE DMGFQGYISN GYEKNHKFML SYGNNSVNGS GNLNQWAEKA  300
TGYFGETPPL EYDLEDVKQL ISSSSNNSCN NNFLIDENKT QERFMYYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	3e-77	MYB family protein