PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637157.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 894aa MW: 101269 Da PI: 6.9718

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.5	1.5e-50	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl+++ei+aiL n++ + + ++ + pksg + L++rkk+r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_021637157.1 30 EEaSSRWLRPNEIHAILCNYKYFVINVKPVHLPKSGVIKLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 124 55589**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ XP_021637157.1 125 RCYWLLDKTLEHIVLVHYRETQ 146 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 894 aa Download sequence
MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH 60 LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQEQLQ GSPVTPMNSN SSSVSDQSPW LLSEEFDSGA 180 GHAYYAGVKE PLGDFTEPGD SSTVRDHEMR LHEINTLEWD ELVMNDLNIS PMPKGDKSMS 240 FDQHNQIAVN GSMNDEDAYT KPTRVQGNVQ KKDSSILGTG DSSDLLVNDG LQSQDSFGRW 300 INDIIADSAG SVDNAVPDSS ISSGHDSHTS PAIDQLQSSI PEQIFVITDI SHTWAFSSET 360 TKILVTGYFH EQYLHLAKFD LCCVCGDACV HAEIVQVGVY RCLVSPHSPG LVNLFLSLDG 420 HKPISQVLNF EYRSPLRYPA VSSEDKPNWE EFKLQMRLAC LLFSTSRSLS ILTSKVSPAN 480 LKEAKKFAQK TASISHNWAC LIKSIEENRV SFSQAKDSLF EQSLKNMLKE WLLERVVEGC 540 KTTEYDAQGQ GVIHLCAILG YTWAVYLFSW SGLSLDFRDK HGWTALHWAA YFGREKMVAV 600 LLSAGAKPNL VTDPTSDHPG GCTAADLASA KGYDGLAAYL SEKCLVAQFK DMSVAGNVSG 660 SLQTSSTDNV NAENLSEEDL YLKDTLAAYR TVADAAARIQ VAFREHSLKV RTKAVQFANP 720 EDEARNIVAA MKIQHAFRNY ETRKKMAAAA RIQYRFRTWK MRKEFLTMRK HAIRIQAAFR 780 GFQVRRQYCK IVWSVGVLEK AILRWRLKRR GFRGLHVDPI EVVADERQES DVEEDFYRAS 840 RKQAEERVER AVVRVQAMFR SRKAQEEYRR MKLTYNEAEL EYEGLLDHDI NLDG

Sequence ? help Back to Top

Protein Sequence Length: 894 aa Download sequence

MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH  60
LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP  120
TFVRRCYWLL DKTLEHIVLV HYRETQEQLQ GSPVTPMNSN SSSVSDQSPW LLSEEFDSGA  180
GHAYYAGVKE PLGDFTEPGD SSTVRDHEMR LHEINTLEWD ELVMNDLNIS PMPKGDKSMS  240
FDQHNQIAVN GSMNDEDAYT KPTRVQGNVQ KKDSSILGTG DSSDLLVNDG LQSQDSFGRW  300
INDIIADSAG SVDNAVPDSS ISSGHDSHTS PAIDQLQSSI PEQIFVITDI SHTWAFSSET  360
TKILVTGYFH EQYLHLAKFD LCCVCGDACV HAEIVQVGVY RCLVSPHSPG LVNLFLSLDG  420
HKPISQVLNF EYRSPLRYPA VSSEDKPNWE EFKLQMRLAC LLFSTSRSLS ILTSKVSPAN  480
LKEAKKFAQK TASISHNWAC LIKSIEENRV SFSQAKDSLF EQSLKNMLKE WLLERVVEGC  540
KTTEYDAQGQ GVIHLCAILG YTWAVYLFSW SGLSLDFRDK HGWTALHWAA YFGREKMVAV  600
LLSAGAKPNL VTDPTSDHPG GCTAADLASA KGYDGLAAYL SEKCLVAQFK DMSVAGNVSG  660
SLQTSSTDNV NAENLSEEDL YLKDTLAAYR TVADAAARIQ VAFREHSLKV RTKAVQFANP  720
EDEARNIVAA MKIQHAFRNY ETRKKMAAAA RIQYRFRTWK MRKEFLTMRK HAIRIQAAFR  780
GFQVRRQYCK IVWSVGVLEK AILRWRLKRR GFRGLHVDPI EVVADERQES DVEEDFYRAS  840
RKQAEERVER AVVRVQAMFR SRKAQEEYRR MKLTYNEAEL EYEGLLDHDI NLDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	88	RKKLRNFRKDGHNWKKK
2	72	89	RKKLRNFRKDGHNWKKKK
3	73	89	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein