PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637155.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 923aa MW: 104338 Da PI: 6.9084

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.5	1.6e-50	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl+++ei+aiL n++ + + ++ + pksg + L++rkk+r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_021637155.1 30 EEaSSRWLRPNEIHAILCNYKYFVINVKPVHLPKSGVIKLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 124 55589**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ XP_021637155.1 125 RCYWLLDKTLEHIVLVHYRETQ 146 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 923 aa Download sequence
MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH 60 LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQELQG SPVTPMNSNS SSVSDQSPWL LSEEFDSGAG 180 HAYYAGVKEP LEPGDSSTVR DHEMRLHEIN TLEWDELVMN DLNISPMPKG DKSMSFDQHN 240 QIAVNGSMND GISLPAYNLS AEIPPLDNLT EPIARNNNSC LNIPEDAYTK PTRVQGNVQK 300 KDSSILGTGD SSDLLVNDGL QSQDSFGRWI NDIIADSAGS VDNAVPDSSI SSGHDSHTSP 360 AIDQLQSSIP EQIFVITDIS HTWAFSSETT KILVTGYFHE QYLHLAKFDL CCVCGDACVH 420 AEIVQVGVYR CLVSPHSPGL VNLFLSLDGH KPISQVLNFE YRSPLRYPAV SSEDKPNWEE 480 FKLQMRLACL LFSTSRSLSI LTSKVSPANL KEAKKFAQKT ASISHNWACL IKSIEENRVS 540 FSQAKDSLFE QSLKNMLKEW LLERVVEGCK TTEYDAQGQG VIHLCAILGY TWAVYLFSWS 600 GLSLDFRDKH GWTALHWAAY FGREKMVAVL LSAGAKPNLV TDPTSDHPGG CTAADLASAK 660 GYDGLAAYLS EKCLVAQFKD MSVAGNVSGS LQTSSTDNVN AENLSEEDLY LKDTLAAYRT 720 VADAAARIQV AFREHSLKVR TKAVQFANPE DEARNIVAAM KIQHAFRNYE TRKKMAAAAR 780 IQYRFRTWKM RKEFLTMRKH AIRIQAAFRG FQVRRQYCKI VWSVGVLEKA ILRWRLKRRG 840 FRGLHVDPIE VVADERQESD VEEDFYRASR KQAEERVERA VVRVQAMFRS RKAQEEYRRM 900 KLTYNEAELE YEGLLDHDIN LDG

Sequence ? help Back to Top

Protein Sequence Length: 923 aa Download sequence

MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH  60
LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP  120
TFVRRCYWLL DKTLEHIVLV HYRETQELQG SPVTPMNSNS SSVSDQSPWL LSEEFDSGAG  180
HAYYAGVKEP LEPGDSSTVR DHEMRLHEIN TLEWDELVMN DLNISPMPKG DKSMSFDQHN  240
QIAVNGSMND GISLPAYNLS AEIPPLDNLT EPIARNNNSC LNIPEDAYTK PTRVQGNVQK  300
KDSSILGTGD SSDLLVNDGL QSQDSFGRWI NDIIADSAGS VDNAVPDSSI SSGHDSHTSP  360
AIDQLQSSIP EQIFVITDIS HTWAFSSETT KILVTGYFHE QYLHLAKFDL CCVCGDACVH  420
AEIVQVGVYR CLVSPHSPGL VNLFLSLDGH KPISQVLNFE YRSPLRYPAV SSEDKPNWEE  480
FKLQMRLACL LFSTSRSLSI LTSKVSPANL KEAKKFAQKT ASISHNWACL IKSIEENRVS  540
FSQAKDSLFE QSLKNMLKEW LLERVVEGCK TTEYDAQGQG VIHLCAILGY TWAVYLFSWS  600
GLSLDFRDKH GWTALHWAAY FGREKMVAVL LSAGAKPNLV TDPTSDHPGG CTAADLASAK  660
GYDGLAAYLS EKCLVAQFKD MSVAGNVSGS LQTSSTDNVN AENLSEEDLY LKDTLAAYRT  720
VADAAARIQV AFREHSLKVR TKAVQFANPE DEARNIVAAM KIQHAFRNYE TRKKMAAAAR  780
IQYRFRTWKM RKEFLTMRKH AIRIQAAFRG FQVRRQYCKI VWSVGVLEKA ILRWRLKRRG  840
FRGLHVDPIE VVADERQESD VEEDFYRASR KQAEERVERA VVRVQAMFRS RKAQEEYRRM  900
KLTYNEAELE YEGLLDHDIN LDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	88	RKKLRNFRKDGHNWKKK
2	72	89	RKKLRNFRKDGHNWKKKK
3	73	89	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein