PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637151.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 927aa MW: 104758 Da PI: 6.8499

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.5	1.6e-50	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl+++ei+aiL n++ + + ++ + pksg + L++rkk+r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_021637151.1 30 EEaSSRWLRPNEIHAILCNYKYFVINVKPVHLPKSGVIKLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 124 55589**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ XP_021637151.1 125 RCYWLLDKTLEHIVLVHYRETQ 146 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 927 aa Download sequence
MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH 60 LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQELQG SPVTPMNSNS SSVSDQSPWL LSEEFDSGAG 180 HAYYAGVKEP LGDFTEPGDS STVRDHEMRL HEINTLEWDE LVMNDLNISP MPKGDKSMSF 240 DQHNQIAVNG SMNDGISLPA YNLSAEIPPL DNLTEPIARN NNSCLNIPED AYTKPTRVQG 300 NVQKKDSSIL GTGDSSDLLV NDGLQSQDSF GRWINDIIAD SAGSVDNAVP DSSISSGHDS 360 HTSPAIDQLQ SSIPEQIFVI TDISHTWAFS SETTKILVTG YFHEQYLHLA KFDLCCVCGD 420 ACVHAEIVQV GVYRCLVSPH SPGLVNLFLS LDGHKPISQV LNFEYRSPLR YPAVSSEDKP 480 NWEEFKLQMR LACLLFSTSR SLSILTSKVS PANLKEAKKF AQKTASISHN WACLIKSIEE 540 NRVSFSQAKD SLFEQSLKNM LKEWLLERVV EGCKTTEYDA QGQGVIHLCA ILGYTWAVYL 600 FSWSGLSLDF RDKHGWTALH WAAYFGREKM VAVLLSAGAK PNLVTDPTSD HPGGCTAADL 660 ASAKGYDGLA AYLSEKCLVA QFKDMSVAGN VSGSLQTSST DNVNAENLSE EDLYLKDTLA 720 AYRTVADAAA RIQVAFREHS LKVRTKAVQF ANPEDEARNI VAAMKIQHAF RNYETRKKMA 780 AAARIQYRFR TWKMRKEFLT MRKHAIRIQA AFRGFQVRRQ YCKIVWSVGV LEKAILRWRL 840 KRRGFRGLHV DPIEVVADER QESDVEEDFY RASRKQAEER VERAVVRVQA MFRSRKAQEE 900 YRRMKLTYNE AELEYEGLLD HDINLDG

Sequence ? help Back to Top

Protein Sequence Length: 927 aa Download sequence

MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH  60
LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP  120
TFVRRCYWLL DKTLEHIVLV HYRETQELQG SPVTPMNSNS SSVSDQSPWL LSEEFDSGAG  180
HAYYAGVKEP LGDFTEPGDS STVRDHEMRL HEINTLEWDE LVMNDLNISP MPKGDKSMSF  240
DQHNQIAVNG SMNDGISLPA YNLSAEIPPL DNLTEPIARN NNSCLNIPED AYTKPTRVQG  300
NVQKKDSSIL GTGDSSDLLV NDGLQSQDSF GRWINDIIAD SAGSVDNAVP DSSISSGHDS  360
HTSPAIDQLQ SSIPEQIFVI TDISHTWAFS SETTKILVTG YFHEQYLHLA KFDLCCVCGD  420
ACVHAEIVQV GVYRCLVSPH SPGLVNLFLS LDGHKPISQV LNFEYRSPLR YPAVSSEDKP  480
NWEEFKLQMR LACLLFSTSR SLSILTSKVS PANLKEAKKF AQKTASISHN WACLIKSIEE  540
NRVSFSQAKD SLFEQSLKNM LKEWLLERVV EGCKTTEYDA QGQGVIHLCA ILGYTWAVYL  600
FSWSGLSLDF RDKHGWTALH WAAYFGREKM VAVLLSAGAK PNLVTDPTSD HPGGCTAADL  660
ASAKGYDGLA AYLSEKCLVA QFKDMSVAGN VSGSLQTSST DNVNAENLSE EDLYLKDTLA  720
AYRTVADAAA RIQVAFREHS LKVRTKAVQF ANPEDEARNI VAAMKIQHAF RNYETRKKMA  780
AAARIQYRFR TWKMRKEFLT MRKHAIRIQA AFRGFQVRRQ YCKIVWSVGV LEKAILRWRL  840
KRRGFRGLHV DPIEVVADER QESDVEEDFY RASRKQAEER VERAVVRVQA MFRSRKAQEE  900
YRRMKLTYNE AELEYEGLLD HDINLDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	88	RKKLRNFRKDGHNWKKK
2	72	89	RKKLRNFRKDGHNWKKKK
3	73	89	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein