PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637034.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 870aa MW: 99217.4 Da PI: 8.4847

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	160.8	2.6e-50	131	246	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rw +++ei aiL n++ + + ++ + pksg ++L++rkk+r+frkDG++wkkk dgktv+E+he+LKvg+ e +++yYah+e+nptf rr XP_021637034.1 131 EaRTRWFRPNEIQAILCNYKYFLINVKPVHLPKSGDIMLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVRR 225 4499***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_021637034.1 226 CYWLLDKTLEHIVLVHYRETQ 246 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MSFPVYFIQL GLYSFVYYLL FVGRTNAAIK TTHFPCLSPH CNCNWLTIYL QETFSHFQQK 60 LPFRFPSLPL RQLGNCNYCL ILRIFLGSLS SVNLYALSSS METGVQGHLV GSEIHGFHTL 120 QDLDFGNTRE EARTRWFRPN EIQAILCNYK YFLINVKPVH LPKSGDIMLF DRKKLRNFRK 180 DGHNWKKKND GKTVKEAHEH LKVGNEERIH VYYAHGEDNP TFVRRCYWLL DKTLEHIVLV 240 HYRETQEGSP VTPMNSNSSS VSDQSPWLLS EEFDSGVGHA YHVGEKEALE PGDSLTVINH 300 VMRIHEINTL EWDDLVMNNP RNSLIPKGDK ITSFDQRNQV AVNGSLNDIL LTGYFHEQYL 360 HLAKSNLCCV CGDACVRAEI VQAGVYRCLV SPHSPGIVNL FLSLDGLIPI SQVLNFEYRA 420 ALCYPVASSE DKPNWEEFKL QMRLAYLLFS TSRTLNILTS KVSPANLNEA KMFSHKTSSI 480 SHMWAYFIKS IEDGRFSFAQ AKDGLFELSL KNMIKEWLLE RVVEGCKITE YDAQGQGVIH 540 LCAILGYTWA VYLFSSSALS LDFRDKHGWT ALHWASYYGR EKMVAVLLSA GAKPNLVTDP 600 TSENPGGCTA ADLASAKGYD GLAGYLSEKS LVAHFKDMSI AGNVSGSLRT SATDTVNSEN 660 LSEEELYLKD TLAAYRTAAD AAARIQVAFG EHSLKVRTKA VQLTNPEDEA QIIVAAMKIQ 720 HSFRNYETRK KMAAAAHIQY RFRSWKMQKE FLNIREHAIK IQAAFRGFQV RRQCRKIVWS 780 VGVLEKAILR WRLKRRGFRG LRVDPAEVVA EDMQESNAEE DFYHDSRKQA EKRVEKAVVR 840 VQAMFRSKKA QEEYRRMKLT HNQAELCDLP

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MSFPVYFIQL GLYSFVYYLL FVGRTNAAIK TTHFPCLSPH CNCNWLTIYL QETFSHFQQK  60
LPFRFPSLPL RQLGNCNYCL ILRIFLGSLS SVNLYALSSS METGVQGHLV GSEIHGFHTL  120
QDLDFGNTRE EARTRWFRPN EIQAILCNYK YFLINVKPVH LPKSGDIMLF DRKKLRNFRK  180
DGHNWKKKND GKTVKEAHEH LKVGNEERIH VYYAHGEDNP TFVRRCYWLL DKTLEHIVLV  240
HYRETQEGSP VTPMNSNSSS VSDQSPWLLS EEFDSGVGHA YHVGEKEALE PGDSLTVINH  300
VMRIHEINTL EWDDLVMNNP RNSLIPKGDK ITSFDQRNQV AVNGSLNDIL LTGYFHEQYL  360
HLAKSNLCCV CGDACVRAEI VQAGVYRCLV SPHSPGIVNL FLSLDGLIPI SQVLNFEYRA  420
ALCYPVASSE DKPNWEEFKL QMRLAYLLFS TSRTLNILTS KVSPANLNEA KMFSHKTSSI  480
SHMWAYFIKS IEDGRFSFAQ AKDGLFELSL KNMIKEWLLE RVVEGCKITE YDAQGQGVIH  540
LCAILGYTWA VYLFSSSALS LDFRDKHGWT ALHWASYYGR EKMVAVLLSA GAKPNLVTDP  600
TSENPGGCTA ADLASAKGYD GLAGYLSEKS LVAHFKDMSI AGNVSGSLRT SATDTVNSEN  660
LSEEELYLKD TLAAYRTAAD AAARIQVAFG EHSLKVRTKA VQLTNPEDEA QIIVAAMKIQ  720
HSFRNYETRK KMAAAAHIQY RFRSWKMQKE FLNIREHAIK IQAAFRGFQV RRQCRKIVWS  780
VGVLEKAILR WRLKRRGFRG LRVDPAEVVA EDMQESNAEE DFYHDSRKQA EKRVEKAVVR  840
VQAMFRSKKA QEEYRRMKLT HNQAELCDLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	188	RKKLRNFRKDGHNWKKK
2	173	189	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein