PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637030.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 1012aa MW: 114421 Da PI: 7.2855

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637030.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	160.5	3.2e-50	131	246	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rw +++ei aiL n++ + + ++ + pksg ++L++rkk+r+frkDG++wkkk dgktv+E+he+LKvg+ e +++yYah+e+nptf rr XP_021637030.1 131 EaRTRWFRPNEIQAILCNYKYFLINVKPVHLPKSGDIMLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVRR 225 4499***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_021637030.1 226 CYWLLDKTLEHIVLVHYRETQ 246 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1012 aa Download sequence
MSFPVYFIQL GLYSFVYYLL FVGRTNAAIK TTHFPCLSPH CNCNWLTIYL QETFSHFQQK 60 LPFRFPSLPL RQLGNCNYCL ILRIFLGSLS SVNLYALSSS METGVQGHLV GSEIHGFHTL 120 QDLDFGNTRE EARTRWFRPN EIQAILCNYK YFLINVKPVH LPKSGDIMLF DRKKLRNFRK 180 DGHNWKKKND GKTVKEAHEH LKVGNEERIH VYYAHGEDNP TFVRRCYWLL DKTLEHIVLV 240 HYRETQEGSP VTPMNSNSSS VSDQSPWLLS EEFDSGVGHA YHVGEKEALE PGDSLTVINH 300 VMRIHEINTL EWDDLVMNNP RNSLIPKGDK ITSFDQRNQV AVNGSLNDGI SLPAYNLSAE 360 IPPLDNLSEP VANKNSHLNI PEDAYSPSTR VQVNSNVHRK DSSIIGTGDS LDLLVNDGLQ 420 CQDSFGGWIN CTIADSPGSI DNAVLESSIS SGHDSYTSPE IDQLQSSVPE QIFVITDTSH 480 AWAYSTEMTK ILLTGYFHEQ YLHLAKSNLC CVCGDACVRA EIVQAGVYRC LVSPHSPGIV 540 NLFLSLDGLI PISQVLNFEY RAALCYPVAS SEDKPNWEEF KLQMRLAYLL FSTSRTLNIL 600 TSKVSPANLN EAKMFSHKTS SISHMWAYFI KSIEDGRFSF AQAKDGLFEL SLKNMIKEWL 660 LERVVEGCKI TEYDAQGQGV IHLCAILGYT WAVYLFSSSA LSLDFRDKHG WTALHWASYY 720 GREKMVAVLL SAGAKPNLVT DPTSENPGGC TAADLASAKG YDGLAGYLSE KSLVAHFKDM 780 SIAGNVSGSL RTSATDTVNS ENLSEEELYL KDTLAAYRTA ADAAARIQVA FGEHSLKVRT 840 KAVQLTNPED EAQIIVAAMK IQHSFRNYET RKKMAAAAHI QYRFRSWKMQ KEFLNIREHA 900 IKIQAAFRGF QVRRQCRKIV WSVGVLEKAI LRWRLKRRGF RGLRVDPAEV VAEDMQESNA 960 EEDFYHDSRK QAEKRVEKAV VRVQAMFRSK KAQEEYRRMK LTHNQAELCD LP

Sequence ? help Back to Top

Protein Sequence Length: 1012 aa Download sequence

MSFPVYFIQL GLYSFVYYLL FVGRTNAAIK TTHFPCLSPH CNCNWLTIYL QETFSHFQQK  60
LPFRFPSLPL RQLGNCNYCL ILRIFLGSLS SVNLYALSSS METGVQGHLV GSEIHGFHTL  120
QDLDFGNTRE EARTRWFRPN EIQAILCNYK YFLINVKPVH LPKSGDIMLF DRKKLRNFRK  180
DGHNWKKKND GKTVKEAHEH LKVGNEERIH VYYAHGEDNP TFVRRCYWLL DKTLEHIVLV  240
HYRETQEGSP VTPMNSNSSS VSDQSPWLLS EEFDSGVGHA YHVGEKEALE PGDSLTVINH  300
VMRIHEINTL EWDDLVMNNP RNSLIPKGDK ITSFDQRNQV AVNGSLNDGI SLPAYNLSAE  360
IPPLDNLSEP VANKNSHLNI PEDAYSPSTR VQVNSNVHRK DSSIIGTGDS LDLLVNDGLQ  420
CQDSFGGWIN CTIADSPGSI DNAVLESSIS SGHDSYTSPE IDQLQSSVPE QIFVITDTSH  480
AWAYSTEMTK ILLTGYFHEQ YLHLAKSNLC CVCGDACVRA EIVQAGVYRC LVSPHSPGIV  540
NLFLSLDGLI PISQVLNFEY RAALCYPVAS SEDKPNWEEF KLQMRLAYLL FSTSRTLNIL  600
TSKVSPANLN EAKMFSHKTS SISHMWAYFI KSIEDGRFSF AQAKDGLFEL SLKNMIKEWL  660
LERVVEGCKI TEYDAQGQGV IHLCAILGYT WAVYLFSSSA LSLDFRDKHG WTALHWASYY  720
GREKMVAVLL SAGAKPNLVT DPTSENPGGC TAADLASAKG YDGLAGYLSE KSLVAHFKDM  780
SIAGNVSGSL RTSATDTVNS ENLSEEELYL KDTLAAYRTA ADAAARIQVA FGEHSLKVRT  840
KAVQLTNPED EAQIIVAAMK IQHSFRNYET RKKMAAAAHI QYRFRSWKMQ KEFLNIREHA  900
IKIQAAFRGF QVRRQCRKIV WSVGVLEKAI LRWRLKRRGF RGLRVDPAEV VAEDMQESNA  960
EEDFYHDSRK QAEKRVEKAV VRVQAMFRSK KAQEEYRRMK LTHNQAELCD LP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	188	RKKLRNFRKDGHNWKKK
2	173	189	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein