PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021636651.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 211aa    MW: 25089.8 Da    PI: 8.4628
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021636651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.63.9e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien+snrqvt+skRrngi+KKA+E+ vLCda+v+++if+s+gk++ey+s
  XP_021636651.1  9 KRIENSSNRQVTYSKRRNGIMKKAKEITVLCDAKVSLVIFASSGKMHEYCS 59
                    79***********************************************96 PP
2K-box75.31.6e-2571168198
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     y+k+sgk+l++ak+e+l++e++++kke++n+q e+Rhl G+d++sL+ +eL  +e++Le++l  +R++++e+++++ ++  + e+e+++    L+
  XP_021636651.1  71 YHKQSGKRLWDAKHENLSNEIDRIKKENDNMQIELRHLEGQDISSLQPNELIGIEHALENGLACVRERQMEFYKMKKKNEMNLEEENKHLRFILQ 165
                     8999*********************************************************************9998888888888888888777 PP

           K-box  96 kkl 98 
                     ++ 
  XP_021636651.1 166 QQE 168
                     775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MGRGKIEIKR IENSSNRQVT YSKRRNGIMK KAKEITVLCD AKVSLVIFAS SGKMHEYCSP  60
STTLIDMLDM YHKQSGKRLW DAKHENLSNE IDRIKKENDN MQIELRHLEG QDISSLQPNE  120
LIGIEHALEN GLACVRERQM EFYKMKKKNE MNLEEENKHL RFILQQQEMA MEENMREMEN  180
PYHQQRVREY NSQMPFAFRV QPIQPNLQER M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.19e-79MIKC_MADS family protein