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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_020699286.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 1190aa MW: 133476 Da PI: 9.017 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 22.5 | 2.7e-07 | 45 | 80 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
W +E e++++a +++G + W++Ia + +R ++++
XP_020699286.1 45 QWGRDELERFYEAYRKHGRD-WRKIAVAVR-NRPPEMV 80
699***************77.********9.9998877 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 1190 aa Download sequence |
MASARKSRNV NKRFSKVIEE LQDKDGGNPG KKMKKRKLSD MLGSQWGRDE LERFYEAYRK 60 HGRDWRKIAV AVRNRPPEMV EALYNMNKAY LSLPEGHATA AGLIAMMTDH YNILEGSDSD 120 QESNDASRTY RKTPKRGRGK FRLMSKGSDG PYTDLPQYQA ASSSYGCLSL LKWKRSGGSR 180 PRAVGKRTPR IPVPFFLKED RNRIVSPCKL GLKSECNTVD DEGAHVAALA LAEASQRGGS 240 PQISRTPSKR CHLTYSPAPS GENKFGDSKF INCRVDDDHL EGSLGSREAE NGEFIKEASI 300 SETRQKSKKV QRKRSKAVED EPFDDDREAC SGTEEGLNVR KSKDDTEIDI SGGRVLRPSK 360 GSKKRSRQLF FGDESSALDA LQTLADLSLN ILLPTSTIES ESSIQIKEEI HTADFDEKPN 420 ITESLSTNLQ REKSNTVERK DKGHSLAVDG VSRKGTKSSK GLASDPKTSD MKQQNSSSST 480 KVQKRKPKSM IEKTSKSQFE SDPQKIEFHK TEILMEDEKR SLAKVKRVCQ NSMQQKLGKS 540 AKLQERHFTA SDLERVVVDP NEAAVTDSPQ NEVIIPTKSR NRRKMDLQKA LARKESKSSE 600 SGVEEHPDKY PFSNRPYELK ETLCHCLSSQ LLRRWCKFEW FYSAIDYPWF AKSEFVEYLN 660 HVRLGHIPRL TRVEWGVIRS SLGKPRRLSS RFLQQEREKL EQYRESVRSH YAEVRAGVTE 720 GLPADLARPL SVGQRVIACH PRMREVRDGS ILTVDRNRCR VQFDRPELGV EFVMDVDCMP 780 WNPVENIPEA LRRQNLVINK FCSGFSDLRL DEQKEFKTKD SMTFASTENM EAADCTSHVA 840 SYSYPMNTLI NQAKGDTLDA IVQAKAAVNE VAVAAQQAMY GQPFTLAQIQ AREADIRALA 900 DLSRTLDKKE ALLIELRQMN EEVSSKQKNG DHIKDLENFR KQYAMVLLQL RDVNDQVASA 960 LLFLRQRNTY ERNSTLAWNK ANETSMQQGS FNPSALLAND SGSNVVEVIQ SSRQKAKTMV 1020 DVAVQVMHAL KDGEDAFVRI GEALELASNR NSGSTSAIAA VRHTFADAAP ENAAPHQDHV 1080 SSKLEAANIQ APNLKFQSLT NGTEVHCPSE LISSCVATLF MIQRCTERQY PPAEVAQILD 1140 SAVASLQPCC PQNLPIFREI ETCMGIIKNQ MLALVPTPSN GMVTSDAPIL |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 31 | 38 | KKMKKRKL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G21430.2 | 0.0 | MYB_related family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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