PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020698032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WOX | ||||||||
Protein Properties | Length: 192aa MW: 21645.4 Da PI: 9.0574 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.6 | 6.7e-21 | 6 | 66 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a++++ XP_020698032.1 6 STRWCPTPEQLMILEEMYRSgVRTPNASQIQQITSHLsfygKIEGKNVFYWFQNHKARDRQ 66 58*****************99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 121.7 | 3e-39 | 6 | 67 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +tRW+PtpeQ++iLee+y+sG+rtPn+++iq+it++L+ yGkie+kNVfyWFQN+kaR+rqk XP_020698032.1 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQQITSHLSFYGKIEGKNVFYWFQNHKARDRQK 67 79***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MPQVPSTRWC PTPEQLMILE EMYRSGVRTP NASQIQQITS HLSFYGKIEG KNVFYWFQNH 60 KARDRQKLRR RLSRQQVQVA SASLPPHPPP QFFPHLYQPH NPQFFHQGGG FQEPRQGLDL 120 LRKLETCSSR EEASPSGASP ASIYGCEWAA MISGESSMCC HSLKTLELFP TKSTGLKEES 180 STSKSSCSAS TN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28610.1 | 6e-34 | WOX family protein |