PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019195223.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 28594 Da PI: 5.4321 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.6 | 8.8e-20 | 82 | 132 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +++Wv+eIr+p++ +kr++lg++ t+e+Aa+a++ a+++l+g XP_019195223.1 82 PVYRGVRRRN-NNKWVCEIREPTK---QKRIWLGTYPTPEMAARAHDVAALALRG 132 68*****887.8*********964...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MDYSTSNSDP NFCGGYGFPQ GEGWSGSRAS HSYPNFCGGY GFPQGEGWSG GRASHSDEEV 60 ILAESRPKKR AGRKKFKETR HPVYRGVRRR NNNKWVCEIR EPTKQKRIWL GTYPTPEMAA 120 RAHDVAALAL RGQFAATLNF ADSVWRLPVP ASVDAKDLRK AAVEAAEAFR PKECEEEIVI 180 TTPTSVEAPP PPPADDPWNV LSLSPPIMEP DGFLTGMQGG FLGSMADGNL LSPAPSLGKG 240 FSWDEVEVES DVEVSLWSYS I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12610.1 | 1e-48 | ERF family protein |