PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019194835.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 423aa MW: 45090 Da PI: 6.9026

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019194835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	69.1	7.1e-22	280	342	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae eeL+ +v++L+aeN++Lk+e+++l++ ++klk e+ XP_019194835.1 280 ERELKRERRKQSNRESARRSRLRKQAEAEELAMRVQSLTAENMTLKSEINKLTESSDKLKIEN 342 89*********************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MGSSEEGKSC KPEKSSSPTP ELGNIHVYPD WAAMQAYYGP RVTAPAYFNS AVAPGHAPHP 60 YMWGPPQPMI PPYGAPYAAV YAHGGVYAPP GVPVGSHAQG HGVTASPAVS EAMAVASLSA 120 DTSGKSSGNT DQGLIRKLKG FDGLAMSTRN GNTDNSEGGA DQEHSQSADT EGSSDGSNAA 180 GAGENNKKRS RETTPTDSDE KTPTRSYPTP ALELSRATGK VIGMAVSPQN VAGKVMGSVL 240 SPNMATGLEI KSPGANLKAS PTNVPQLDPQ MPNDSWLQSE RELKRERRKQ SNRESARRSR 300 LRKQAEAEEL AMRVQSLTAE NMTLKSEINK LTESSDKLKI ENAALMEKLK NEKLGKMEEL 360 SLGKIADKRP QPVTTVNLLA RVDNSSSVNR NNDEEEEMYE NNSSGTKLQL TDRSPRTDAV 420 AAG

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MGSSEEGKSC KPEKSSSPTP ELGNIHVYPD WAAMQAYYGP RVTAPAYFNS AVAPGHAPHP  60
YMWGPPQPMI PPYGAPYAAV YAHGGVYAPP GVPVGSHAQG HGVTASPAVS EAMAVASLSA  120
DTSGKSSGNT DQGLIRKLKG FDGLAMSTRN GNTDNSEGGA DQEHSQSADT EGSSDGSNAA  180
GAGENNKKRS RETTPTDSDE KTPTRSYPTP ALELSRATGK VIGMAVSPQN VAGKVMGSVL  240
SPNMATGLEI KSPGANLKAS PTNVPQLDPQ MPNDSWLQSE RELKRERRKQ SNRESARRSR  300
LRKQAEAEEL AMRVQSLTAE NMTLKSEINK LTESSDKLKI ENAALMEKLK NEKLGKMEEL  360
SLGKIADKRP QPVTTVNLLA RVDNSSSVNR NNDEEEEMYE NNSSGTKLQL TDRSPRTDAV  420
AAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	297	303	RRSRLRK
2	297	304	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	2e-70	bZIP family protein