PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019193757.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 586aa MW: 63316 Da PI: 7.278

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019193757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	329	387	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_019193757.1 329 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 387 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MASRSGLSFD PDPITLHPRH RSKPPSSQPT QNHRHHFIKL EPFLSPSSME SPVNNRSPPP 60 TIQFPVNLNC SDHRARHAQE HQDHKTTVLG EMDFFAYTKD NGDSRASAVD DDVKDLRTST 120 ELDFTINTGL HLLTANTSSD QSIVEDELSP NSEDKRAKSE LAVVQAELER MNGENRRLRD 180 TLNQVNNNYT SLQMHLMTLM QQQQSNGKME ESKQTRHNNN GGQMVPRQFM DLGLAPGGGG 240 GGGGPTEPDE ASLSSSEGRS GRERSQSPTN NIDEASREDS PEKGSGWGSN KVARSGNASK 300 GGSVDQATEA TMRKARVSVR ARSEAPMITD GCQWRKYGQK MAKGNPCPRA YYRCTMAAGC 360 PVRKQVQRCA EDRTILITTY EGNHNHPLPP AAMAMASTTS SAAKMLLSGS MPSADGLMNS 420 NFLARTLLPC SSSMATISAS APFPTVTLDL TQNQNPNQTQ FPRPPNPFQF PFPNPSQNTA 480 AALLPQIFGQ ALYNQSKFSG LQLSQDLENN IHAPSSMPPH QSSPQNPLAD TVNALASDPN 540 FTAALAAAIT SLIGNPSHSG NVTNTSNANN NGSVITSSNG NDKVNS

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MASRSGLSFD PDPITLHPRH RSKPPSSQPT QNHRHHFIKL EPFLSPSSME SPVNNRSPPP  60
TIQFPVNLNC SDHRARHAQE HQDHKTTVLG EMDFFAYTKD NGDSRASAVD DDVKDLRTST  120
ELDFTINTGL HLLTANTSSD QSIVEDELSP NSEDKRAKSE LAVVQAELER MNGENRRLRD  180
TLNQVNNNYT SLQMHLMTLM QQQQSNGKME ESKQTRHNNN GGQMVPRQFM DLGLAPGGGG  240
GGGGPTEPDE ASLSSSEGRS GRERSQSPTN NIDEASREDS PEKGSGWGSN KVARSGNASK  300
GGSVDQATEA TMRKARVSVR ARSEAPMITD GCQWRKYGQK MAKGNPCPRA YYRCTMAAGC  360
PVRKQVQRCA EDRTILITTY EGNHNHPLPP AAMAMASTTS SAAKMLLSGS MPSADGLMNS  420
NFLARTLLPC SSSMATISAS APFPTVTLDL TQNQNPNQTQ FPRPPNPFQF PFPNPSQNTA  480
AALLPQIFGQ ALYNQSKFSG LQLSQDLENN IHAPSSMPPH QSSPQNPLAD TVNALASDPN  540
FTAALAAAIT SLIGNPSHSG NVTNTSNANN NGSVITSSNG NDKVNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-114	WRKY family protein